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>P0AFF9_LOOPS
13-20, 50-60, 81-93, 145-158, 164-202, 227-255, 265-282, 287-303, 331-340, 393-402, 422-440, 464-474
mnkeilavve avSNEKALPR ekifealesa latatkkkye qeidvrvqiD RKSGDFDTFR rwlvvdevtq ptkeitleaa RYEDESLNLG DYVedqiesv tfdrittqta kqvivqkvre aeramvvdqf rehegeiitg vvkkVNRDNI SLDLGNNAea vilREDMLPR ENFRPGDRVR GVLYSVRPEA RGAQLFVTRS KPemlielfr ievpeigeev ieikaaARDP GSRAKIAVKT NDKRIDPVGA CVGMRgarvq avstELGGER IDIVLWDDNP AQfvinAMAP ADVASIVVDE DKHtmdiave agnlaqaigr ngqnvrlasq LSGWELNVMT vddlqakhqa eahaaidtft kyldidedfa tvlveegfst leelayvpmk elLEIEGLDE PTvealrera knalatiaqa qEESLGDNKP ADDLLNLEGV drdlafklaa rgvctledla eqgIDDLADI EGLTdekaga limaarnicw fgdea
>P0AFF9_HOTLOOPS
10-21, 34-89, 101-109, 127-204, 224-255, 420-432
mnkeilavvE AVSNEKALPR Ekifealesa latATKKKYE QEIDVRVQID RKSGDFDTFR RWLVVDEVTQ PTKEITLEAA RYEDESLNLg dyvedqiesv TFDRITTQTa kqvivqkvre aeramvVDQF REHEGEIITG VVKKVNRDNI SLDLGNNAEA VILREDMLPR ENFRPGDRVR GVLYSVRPEA RGAQLFVTRS KPEMlielfr ievpeigeev ieiKAAARDP GSRAKIAVKT NDKRIDPVGA CVGMRgarvq avstelgger idivlwddnp aqfvinamap advasivvde dkhtmdiave agnlaqaigr ngqnvrlasq lsgwelnvmt vddlqakhqa eahaaidtft kyldidedfa tvlveegfst leelayvpmk elleieglde ptvealrera knalatiaqA QEESLGDNKP ADdllnlegv drdlafklaa rgvctledla eqgiddladi egltdekaga limaarnicw fgdea
>P0AFF9_REM465
none
mnkeilavve avsnekalpr ekifealesa latatkkkye qeidvrvqid rksgdfdtfr rwlvvdevtq ptkeitleaa ryedeslnlg dyvedqiesv tfdrittqta kqvivqkvre aeramvvdqf rehegeiitg vvkkvnrdni sldlgnnaea vilredmlpr enfrpgdrvr gvlysvrpea rgaqlfvtrs kpemlielfr ievpeigeev ieikaaardp gsrakiavkt ndkridpvga cvgmrgarvq avstelgger idivlwddnp aqfvinamap advasivvde dkhtmdiave agnlaqaigr ngqnvrlasq lsgwelnvmt vddlqakhqa eahaaidtft kyldidedfa tvlveegfst leelayvpmk elleieglde ptvealrera knalatiaqa qeeslgdnkp addllnlegv drdlafklaa rgvctledla eqgiddladi egltdekaga limaarnicw fgdea
| JOB-ID | P0AFF9_051433ZinmuX8AAQEAAB1mKEwAAABY |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P0AFF9 |
| Description | sp|P0AFF9|NUSA_SHIFL Transcription termination/antitermination protein NusA OS=Shigella flexneri OX=623 GN=nusA PE=3 SV=1 |
| Title/ID | none |
| Sequence length | 495 |
| Download predictions | smoothed scores raw scores |