>P0CK31_LOOPS
1-25, 43-73, 83-113, 163-189, 195-208, 216-230, 242-249, 272-281, 287-308, 313-329, 371-413, 437-445, 457-464, 476-485, 497-505, 513-594, 609-643, 658-696, 705-715, 729-750, 765-776, 789-815, 826-835, 851-899, 920-932, 946-961, 992-1016, 1065-1099, 1115-1122, 1178-1191, 1198-1214, 1243-1251
MSSMILTQFG PFIESISGIT DQSNDvfeda akafsmftrs dvYKALDEIP FSDDAMLPIP PTIYTKPSHD SYYyidalnr vrRKTYQGPD DVYVPNCSIV ELLEPHETLT SYGrlseaie nrakdgdsqa riattygria esqarqikap lekfvlallv aeAGGSLYDP VLQKYDEIPD LSHNCPLWCf reicRHISGP LPDRAPYLyl sagvfWLMSP RMTSAIPPLL sdlvnlailq qTAGLDPSLv klgvqiclha aasssyswfi lKTKSIFPQN TlhsmyESLE GGYCPNLEWL EPRSDYKFmy mgVMPLSAKY ARSAPSNDKk arelgekygl ssvvgelrkr tktyvkhdfa svryirdama CTSGIFLVRT PTETVLQEYT QSPEIKVPIP QKDWTGPIGE IRIlkdttss iarylyrtwy laaarmAAQP RTWDPlfqai mrsqyvTARG GSGAalresl yainvSLPDF KGLPVkaatk ifqaaqLANL PFSHTsvail adTSMGLRNQ VQRRPRSIMP LNVPQQQVSA PHTLTADYIN YHMNLSPTSG SAVIEKVIPL GVYASSPPNQ SINIDISACD ASITwdffls vimaaiheGV ASSSIGKPFM GVPASIVNDE SVVGVRAARP ISGmqnmiqh lsklykrGFS YRVNDSFSPG NDFTHMTTTF PSGSTATSTE HTANNStmme tfltVWGPEH TDDPDvlrlm ksltiqrnYV CQGDDGLMII DGTTAGKVNS etiqndleli skygEEFGWK YDIAYDgtae ylklyfifGC RIPNLSRHPI VGKERANSSA EEPWPaildq imgvfFNGVH DGLQWqrwir yswalccafs RQRTMIGESV GYLQYPMWSF VYWGLPLVKA FGSDPWIFSW YMPTGDLGMy swislirplm trwmvangyV TDRCSTVFGN ADyrrcfnel klyqgYYMAQ LPRNPKKSGR Aasrevreqf tqalsdylmq npelksrvlr gRSEWEKYGA GIIHNPPSLF DVPHKWyqga qeaaiatree laemdetlmr arrhsyssfs klleayllvk wrmcEAREPS VDLRLPLCAG IDPLNSDPFL KMVSVGPMLq strkyfaqtl fmakTVSGLD VNaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvntv qlarvvnLAV PDTWMSLDFD SmfkhhvKLL PKDGRHLNTD IPPRmgwlra ilrflgagmv mtatgvavdi ylEDIHGGGR Slgqrfmtwm rqegrsa
>P0CK31_HOTLOOPS
63-71, 120-130, 331-365, 389-418, 524-539, 975-984, 1200-1212, 1260-1267
mssmiltqfg pfiesisgit dqsndvfeda akafsmftrs dvykaldeip fsddamlpip ptIYTKPSHD Syyyidalnr vrrktyqgpd dvyvpncsiv ellephetlt sygrlseaiE NRAKDGDSQA riattygria esqarqikap lekfvlallv aeaggslydp vlqkydeipd lshncplwcf reicrhisgp lpdrapylyl sagvfwlmsp rmtsaippll sdlvnlailq qtagldpslv klgvqiclha aasssyswfi lktksifpqn tlhsmyesle ggycpnlewl eprsdykfmy mgvmplsaky arsapsndkk ARELGEKYGL SSVVGELRKR TKTYVKHDFA SVRYIrdama ctsgiflvrt ptetvlqeYT QSPEIKVPIP QKDWTGPIGE IRILKDTTss iarylyrtwy laaarmaaqp rtwdplfqai mrsqyvtarg gsgaalresl yainvslpdf kglpvkaatk ifqaaqlanl pfshtsvail adtsmglrnq vqrRPRSIMP LNVPQQQVSa phtltadyin yhmnlsptsg saviekvipl gvyassppnq sinidisacd asitwdffls vimaaihegv asssigkpfm gvpasivnde svvgvraarp isgmqnmiqh lsklykrgfs yrvndsfspg ndfthmtttf psgstatste htannstmme tfltvwgpeh tddpdvlrlm ksltiqrnyv cqgddglmii dgttagkvns etiqndleli skygeefgwk ydiaydgtae ylklyfifgc ripnlsrhpi vgkeranssa eepwpaildq imgvffngvh dglqwqrwir yswalccafs rqrtmigesv gylqypmwsf vywglplvka fgsdpwifsw ymptgdlgmy swislirplm trwmvangyv tdrcstvfgn adyrrcfnel klyqgyymaq lprnpkksgr aasrevreqf tqalSDYLMQ NPELksrvlr grsewekyga giihnppslf dvphkwyqga qeaaiatree laemdetlmr arrhsyssfs klleayllvk wrmceareps vdlrlplcag idplnsdpfl kmvsvgpmlq strkyfaqtl fmaktvsgld vnaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvntv qlarvvnlav pdtwmsldfd smfkhhvklL PKDGRHLNTD IPprmgwlra ilrflgagmv mtatgvavdi yledihgggr slgqrfmtwM RQEGRSA
>P0CK31_REM465
321-332, 681-690, 803-811, 954-967
mssmiltqfg pfiesisgit dqsndvfeda akafsmftrs dvykaldeip fsddamlpip ptiytkpshd syyyidalnr vrrktyqgpd dvyvpncsiv ellephetlt sygrlseaie nrakdgdsqa riattygria esqarqikap lekfvlallv aeaggslydp vlqkydeipd lshncplwcf reicrhisgp lpdrapylyl sagvfwlmsp rmtsaippll sdlvnlailq qtagldpslv klgvqiclha aasssyswfi lktksifpqn tlhsmyesle ggycpnlewl eprsdykfmy mgvmplsaky ARSAPSNDKK ARelgekygl ssvvgelrkr tktyvkhdfa svryirdama ctsgiflvrt ptetvlqeyt qspeikvpip qkdwtgpige irilkdttss iarylyrtwy laaarmaaqp rtwdplfqai mrsqyvtarg gsgaalresl yainvslpdf kglpvkaatk ifqaaqlanl pfshtsvail adtsmglrnq vqrrprsimp lnvpqqqvsa phtltadyin yhmnlsptsg saviekvipl gvyassppnq sinidisacd asitwdffls vimaaihegv asssigkpfm gvpasivnde svvgvraarp isgmqnmiqh lsklykrgfs yrvndsfspg ndfthmtttf PSGSTATSTE htannstmme tfltvwgpeh tddpdvlrlm ksltiqrnyv cqgddglmii dgttagkvns etiqndleli skygeefgwk ydiaydgtae ylklyfifgc ripnlsrhpi vgKERANSSA Eepwpaildq imgvffngvh dglqwqrwir yswalccafs rqrtmigesv gylqypmwsf vywglplvka fgsdpwifsw ymptgdlgmy swislirplm trwmvangyv tdrcstvfgn adyrrcfnel klyqgyymaq lprNPKKSGR AASREVReqf tqalsdylmq npelksrvlr grsewekyga giihnppslf dvphkwyqga qeaaiatree laemdetlmr arrhsyssfs klleayllvk wrmceareps vdlrlplcag idplnsdpfl kmvsvgpmlq strkyfaqtl fmaktvsgld vnaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvntv qlarvvnlav pdtwmsldfd smfkhhvkll pkdgrhlntd ipprmgwlra ilrflgagmv mtatgvavdi yledihgggr slgqrfmtwm rqegrsa
JOB-ID | P0CK31_062630ZgZfFn8AAQEAAF8-r6IAAABJ |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P0CK31 |
Description | sp|P0CK31|RDRP_REOVD RNA-directed RNA polymerase lambda-3 OS=Reovirus type 3 (strain Dearing) OX=10886 GN=L1 PE=1 SV=1 |
Title/ID | none |
Sequence length | 1267 |
Download predictions | smoothed scores raw scores |