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>P0CK32_LOOPS
1-25, 43-73, 83-113, 162-189, 195-208, 216-230, 242-249, 273-281, 287-329, 371-413, 437-445, 457-464, 476-485, 497-505, 513-546, 552-562, 567-594, 609-643, 658-696, 705-715, 729-748, 765-776, 789-815, 826-835, 851-899, 918-933, 946-964, 992-1018, 1065-1099, 1115-1122, 1179-1191, 1198-1214
MSSMILTQFR PFIESISGIT DQSNDvfeda akafsmftrs dvYKALDEIP FSDDAMLPIP PTIYTKPSHD SYYyidalnr vrRKTYQGPD DVYVPNCSIV ELLEPHETLT SYGrlseaie nrakdgdsqa riattygria esqarqikap lekfvlallv sEAGGSLYDP VLQKYDEIPD LSHNCPLWCf reicRHISGP LPDRAPYLyl sagvfWLMSP RMTSAIPPLL sdlvnlailq qTAGLDPSLv klgvqiclha aasssyawfi lkTKSIFPQN TlhsmyESLE GGYCPNLEWL EPRSDYKFMY MGVMPLSTKY ARSAPSNDKk arelgekygl ssvvselrkr tktyvkhdfa svryirdama CTSGIFLVRT PTETVLQEYT QSPEIKVPIP QKDWTGPVGE IRIlkdttss iarylyrtwy laaarmAAQP RTWDPlfqai mrsqyvTARG GSGAalresl yainvSLPDF KGLPVkaatk ifqaaqLANL PFSHTsvail adTSMGLRNQ VQRRPRSIMP LNVPQQQVSA PHTLTAdyin yHMNLSTTSG SAviekVIPL GVYASSPPNQ SINIDISACD ASITwdffls vimaaiheGV ASGSIGKPFM GVPASIVNDE SVVGVRAARP ISGmqnmiqh lsklykrGFS YRVNDSFSPG NDFTHMTTTF PSGSTATSTE HTANNStmme tfltVWGPEH TDDPDvlrlm ksltiqrnYV CQGDDGLMII DGNTAGKVns etiqkmleli skygEEFGWK YDIAYDgtae ylklyfifGC RIPNLSRHPI VGKERANSSA EEPWPaildq imgifFNGVH DGLQWqrwir yswalccafs RQRTMIGESV GYLQYPMWSF VYWGLPLVKV FGSDPWIFSW YMPTGDLGMy swislirplm trwmvanGYA TDRCSPVFGN ADYrrcfnei klyqgYYMAQ LPRNPTKSGR AAPRevreqf tqalsdylmq npelksrvlr gRSEWEKYGA GIIHNPPSLF DVPHKWYLga qeaatatree laemdetlmr arrhsyssfs klleayllvk wrmcEAREPS VDLRLPLCAG IDPLNSDPFL KMVSVGPMLq strkyfaqtl fmakTVSGLD VNaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvstv qlarvvnlAV PDTWMSLDFD SmfkhhvKLL PKDGRHLNTD IPPRmgwlra ilrflgagmv mtatgvavdi yledihgggr algqrfmtwm rqegrsa
>P0CK32_HOTLOOPS
63-71, 120-130, 332-365, 389-419, 524-539, 976-984, 1200-1212, 1260-1267
mssmiltqfr pfiesisgit dqsndvfeda akafsmftrs dvykaldeip fsddamlpip ptIYTKPSHD Syyyidalnr vrrktyqgpd dvyvpncsiv ellephetlt sygrlseaiE NRAKDGDSQA riattygria esqarqikap lekfvlallv seaggslydp vlqkydeipd lshncplwcf reicrhisgp lpdrapylyl sagvfwlmsp rmtsaippll sdlvnlailq qtagldpslv klgvqiclha aasssyawfi lktksifpqn tlhsmyesle ggycpnlewl eprsdykfmy mgvmplstky arsapsndkk aRELGEKYGL SSVVSELRKR TKTYVKHDFA SVRYIrdama ctsgiflvrt ptetvlqeYT QSPEIKVPIP QKDWTGPVGE IRILKDTTSs iarylyrtwy laaarmaaqp rtwdplfqai mrsqyvtarg gsgaalresl yainvslpdf kglpvkaatk ifqaaqlanl pfshtsvail adtsmglrnq vqrRPRSIMP LNVPQQQVSa phtltadyin yhmnlsttsg saviekvipl gvyassppnq sinidisacd asitwdffls vimaaihegv asgsigkpfm gvpasivnde svvgvraarp isgmqnmiqh lsklykrgfs yrvndsfspg ndfthmtttf psgstatste htannstmme tfltvwgpeh tddpdvlrlm ksltiqrnyv cqgddglmii dgntagkvns etiqkmleli skygeefgwk ydiaydgtae ylklyfifgc ripnlsrhpi vgkeranssa eepwpaildq imgiffngvh dglqwqrwir yswalccafs rqrtmigesv gylqypmwsf vywglplvkv fgsdpwifsw ymptgdlgmy swislirplm trwmvangya tdrcspvfgn adyrrcfnei klyqgyymaq lprnptksgr aaprevreqf tqalsDYLMQ NPELksrvlr grsewekyga giihnppslf dvphkwylga qeaatatree laemdetlmr arrhsyssfs klleayllvk wrmceareps vdlrlplcag idplnsdpfl kmvsvgpmlq strkyfaqtl fmaktvsgld vnaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvstv qlarvvnlav pdtwmsldfd smfkhhvklL PKDGRHLNTD IPprmgwlra ilrflgagmv mtatgvavdi yledihgggr algqrfmtwM RQEGRSA
>P0CK32_REM465
321-332, 681-690, 803-811, 955-965
mssmiltqfr pfiesisgit dqsndvfeda akafsmftrs dvykaldeip fsddamlpip ptiytkpshd syyyidalnr vrrktyqgpd dvyvpncsiv ellephetlt sygrlseaie nrakdgdsqa riattygria esqarqikap lekfvlallv seaggslydp vlqkydeipd lshncplwcf reicrhisgp lpdrapylyl sagvfwlmsp rmtsaippll sdlvnlailq qtagldpslv klgvqiclha aasssyawfi lktksifpqn tlhsmyesle ggycpnlewl eprsdykfmy mgvmplstky ARSAPSNDKK ARelgekygl ssvvselrkr tktyvkhdfa svryirdama ctsgiflvrt ptetvlqeyt qspeikvpip qkdwtgpvge irilkdttss iarylyrtwy laaarmaaqp rtwdplfqai mrsqyvtarg gsgaalresl yainvslpdf kglpvkaatk ifqaaqlanl pfshtsvail adtsmglrnq vqrrprsimp lnvpqqqvsa phtltadyin yhmnlsttsg saviekvipl gvyassppnq sinidisacd asitwdffls vimaaihegv asgsigkpfm gvpasivnde svvgvraarp isgmqnmiqh lsklykrgfs yrvndsfspg ndfthmtttf PSGSTATSTE htannstmme tfltvwgpeh tddpdvlrlm ksltiqrnyv cqgddglmii dgntagkvns etiqkmleli skygeefgwk ydiaydgtae ylklyfifgc ripnlsrhpi vgKERANSSA Eepwpaildq imgiffngvh dglqwqrwir yswalccafs rqrtmigesv gylqypmwsf vywglplvkv fgsdpwifsw ymptgdlgmy swislirplm trwmvangya tdrcspvfgn adyrrcfnei klyqgyymaq lprnPTKSGR AAPREvreqf tqalsdylmq npelksrvlr grsewekyga giihnppslf dvphkwylga qeaatatree laemdetlmr arrhsyssfs klleayllvk wrmceareps vdlrlplcag idplnsdpfl kmvsvgpmlq strkyfaqtl fmaktvsgld vnaidsallr lrtlgadkka ltaqllmvgl qeseadalag kimlqdvstv qlarvvnlav pdtwmsldfd smfkhhvkll pkdgrhlntd ipprmgwlra ilrflgagmv mtatgvavdi yledihgggr algqrfmtwm rqegrsa
| JOB-ID | P0CK32_152905ZivIQX8AAQEAAHG53b4AAAAN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P0CK32 |
| Description | sp|P0CK32|RDRP_REOVL RNA-directed RNA polymerase lambda-3 OS=Reovirus type 1 (strain Lang) OX=10884 GN=L1 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1267 |
| Download predictions | smoothed scores raw scores |