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>P12493_LOOPS
1-30, 43-54, 64-72, 120-149, 162-183, 211-239, 248-260, 275-294, 349-358, 368-424, 435-500
MGARASVLSG GELDKWEKIR LRPGGKKQYK lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tiavlycvhq ridvkdtkea ldkieeeqnk skkkaqqaaA DTGNNSQVSQ NYPIVQNLQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaa EWDRLHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqiGWM THNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpg atleemmtAC QGVGGPGHka rvlaeamSQV TNPATIMIQK GNFRNQRKTV KCFNCGKEGH IAKNCRAPRK KGCWKCGKEG HQMKdcterq anflGKIWPS HKGRPGNFLQ SRPEPTAPPE ESFRFGEETT TPSQKQEPID KELYPLASLR SLFGSDPSSQ
>P12493_HOTLOOPS
1-31, 120-129, 280-292, 377-386, 393-410, 438-500
MGARASVLSG GELDKWEKIR LRPGGKKQYK Lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tiavlycvhq ridvkdtkea ldkieeeqnk skkkaqqaaA DTGNNSQVSq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm thnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpg atleemmtac qgvggpghka rvlaeamsqv tnpatiMIQK GNFRNQrktv kcFNCGKEGH IAKNCRAPRK kgcwkcgkeg hqmkdcterq anflgkiWPS HKGRPGNFLQ SRPEPTAPPE ESFRFGEETT TPSQKQEPID KELYPLASLR SLFGSDPSSQ
>P12493_REM465
1-9, 106-126, 451-476
MGARASVLSg geldkwekir lrpggkkqyk lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tiavlycvhq ridvkdtkea ldkieEEQNK SKKKAQQAAA DTGNNSqvsq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm thnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpg atleemmtac qgvggpghka rvlaeamsqv tnpatimiqk gnfrnqrktv kcfncgkegh iakncraprk kgcwkcgkeg hqmkdcterq anflgkiwps hkgrpgnflq SRPEPTAPPE ESFRFGEETT TPSQKQepid kelyplaslr slfgsdpssq
| JOB-ID | P12493_051712ZiiV2H8AAQEAAE7yzoMAAABC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P12493 |
| Description | sp|P12493|GAG_HV1N5 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate NY5) OX=11698 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 500 |
| Download predictions | smoothed scores raw scores |