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>P17763_LOOPS
1-14, 35-43, 57-76, 118-144, 160-228, 277-297, 308-322, 345-371, 376-405, 424-473, 494-509, 546-558, 606-658, 696-708, 747-756, 777-801, 871-938, 994-1115, 1127-1136, 1189-1198, 1240-1249, 1308-1333, 1338-1352, 1367-1379, 1405-1417, 1423-1434, 1452-1460, 1472-1492, 1505-1513, 1536-1545, 1553-1569, 1575-1633, 1644-1656, 1664-1680, 1713-1727, 1743-1772, 1791-1845, 1872-1879, 1887-1925, 1933-1961, 1971-1998, 2028-2052, 2059-2082, 2089-2098, 2168-2176, 2213-2227, 2274-2281, 2323-2349, 2385-2406, 2439-2459, 2487-2500, 2517-2549, 2562-2582, 2588-2653, 2692-2710, 2736-2766, 2776-2812, 2820-2862, 2876-2890, 2895-2918, 2932-2942, 2980-3005, 3014-3051, 3063-3102, 3116-3130, 3151-3162, 3176-3203, 3213-3241, 3273-3295, 3310-3349, 3380-3392
MNNQRKKTGR PSFNmlkrar nrvstvsqla krfsKGLLSG QGPmklvmaf iaflrfLAIP PTAGILARWG SFKKNGaikv lrgfkkeisn mlnimnrrkr svtmllmllp talafhlTTR GGEPHMIVSK QERGKSLLFK TSAGvnmctl iamdlgelcE DTMTYKCPRI TETEPDDVDC WCNATETWVT YGTCSQTGEH RRDKRSVALA PHVGLGLETR TETWMSSEga wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtPSMA MRCVGIGNRD FVEGLSGatw vdvvlehGSC VTTMAKDKPT LDiellktev tnpavlrklc ieakISNTTT DSRCPTQGEA TLVEEQDTNF VcrrtFVDRG WGNGCGLFGK GSLITCAKFK CVTKLegkiv qyenlkysvi vtvHTGDQHQ VGNETTEHGT TATITPQAPT SEIQLTDYGA LTLDCSPRTG LDFnemvllt mekkswlvhk qwfLDLPLPW TSGASTSQEt wnrqdllvtf ktahakkqev vvlgsqegam htaltGATEI QTSGTTTIfa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkYEGTD APCKIPFSSQ DEKGVTQNGR LITANPIVTD KEKPVNIEAE PPFGESYIvv gagekalkls wfkkgssigk mfeatargar rmailGDTAW DFGSIGGVft svgklihqif gtaygvlfsg vswtmkigig illtwlGLNS RSTSLSmtci avgmvtlylg vmvqadSGCV INWKGRELKC GSGIFVTNEV Htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdvsg ILAQGKKMIR PQPMEHKYSW KSWGKAKIIG ADVQNTTFII DGPNTPECPD NQRAWNIWEV EDYGFGIFtt niwlklrdsy tqvcdhrlms aaikdskavh admgywiese knetwklara sfiEVKTCIW PKSHTLWSNG VLESEMIIPK IYGGPISQHN YRPGYFTQTA GPWHLGKLEL DFDLCEGTTV VVDEHCGNRG PSLRTTTVTG KTIHEWCCRS CTLPPLRFKG EDGCWYGMEI RPVKEkeenl vksmvsAGSG EVDSFSlgll cisimieevm rsrwsrkmlm tgtlavflll tmgqltwndl irlcimvgAN ASDKMGMGtt ylalmatfrm rpmfavgllf rrltsrevll ltvglslvaS VELPNSLEEl gdglamgimm lklltdfqsh qlwatllslt fvkttfslhy awktmamils ivslfplCLS TTSQKTTWLP VLLGSLGCKP LTMflitENK IWGRKSWPLN EGimavgivs illsslLKND VPLAGPLIAg gmliacyvis gssadlslek aaevSWEEEA EHSGASHnil veVQDDGTMK IKDEerddtl tillkatlla iSGVYPMSIP atlfvwyfwq kKKQRSGVLW DTPSPPEVER AVlddgiyri lqrgLLGRSQ VGVgvfqegv fhtmwhvtrg avlmyQGKRL EPSWAsvkkd liSYGGGWRF QGSWNAGEEv qviaVEPGKN PKNVQTAPGT FKTPEGEVGA IALDFKPGTS GSPIVNREGK IVGLYGNGVV TTSgtyvsai aqaKASQEGP LPEIEDevfr krnLTIMDLH PGSGKTRRYL paivreairr nvrtlvlapt rvvasemaea lkGMPIRYQT TAVKSEHtgk eivdlmchat ftMRLLSPVR VPNYNMIIMD EAHFTDPASI AArgyistrv gmgeaaaifm TATPPGSVEA FPQSNAVIQD EERDIPERSW NSGYDWITDF PGKTVWFVPS IKSGNdianc lrkngkrvvq lsrktfdtey qKTKNNDWDy vvttdiSEMG ANFRADRVID PRRCLKPVIL KDGPERVILA GPMPVtvasa aqRRGRIGRN QNKEGDQYIY MGQPLNNDED Hahwteakml LDNINTPEGI IPALFEPERE KSAAIDGEyr lrgearktfv elmrrgdlpv wlsykvaSEG FQYSDRRWCF DGERNNQVLE ENmdveiwTK EGERKKLRPR WLDARTYSDP LAlrefkeFA AGRRSVSGdl ileigklpqh ltqraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvtlfflSGR GLGKTSigll cviassallw masvephwia asiilefflm vlLIPEPDRQ RTPQDNQlay vvigllfmil taaanemgll ettkkdlgig haaaenhhha amlDVDLHPA Sawtlyavat tiitpmmrht ienttanisl taianqaail mgLDKGWPIS KMDIGVPLLA LGCYSQVNPl tltaavfmlv ahyaiigpgl qakatreaqk rtaaGIMKNP TVDGIVAIDL DPVVYDakfe kqlgqimlli lctsqillmr ttwalcesIT LATGPLTTLW EGSPGKFWNt tiavsmanif rgsylagagl afslmkSLGG GRRGTGAQGE tlgekwkrql nqlsksEFNT YKRSGIIEVD RSEAKEGLKR GEPTKHAVSr gtaklrwfve rNLVKPEGKV IDLGCGRGGW SYycaglKKV TEVKGYTKGG PGHEEPIPMA TYGWNLVKLY SGKDVFFTPP EKCDTLLCDI GESSPNPTIE EGRtlrvlkm vepwlrgnqf cikilnpymp svvetleqmq rKHGGMLVRN PLSRNSTHEM ywvscgtgni vsavnmtsrm llnrfTMAHR KPTYERDVDL GAGTRHVAVE PEVANLdiig qrienIKNGH KSTWHYDEDN PYKTWAYHGS YEVKPSGSAS SMvngvvrlL TKPWDVIPMV TQIAMTDTTP FGQQRVFKEK VDTRTPKAKR GTaqimevta rwlwgFLSRN KKPRICTREE ftrkVRSNAA IGAVFVDENQ WNSAKEAVed erfwdlvhre rELHKQGKCA TCvynmmgkr ekklgefgka kgsraiwymw lgarflefeA LGFMNEDHWF SRENSLSGVE GEGLHklgyi lrdISKIPGG NMYADDTAGW DTRITEDDLQ NEAKITDIME Pehallatsi fkLTYQNKVV RVQRPAKNGT VMDVISRRDQ RGSGQVGTYG LNtftnmeaq lirqmESEGI FSPSELETPN laervldwlk khgterlkrm AISGDDCVVK PIddrfatal talndMGKVR KDIPQWEPSK GWNDWQQVPF CSHhfhqlim kdGREIVVPC RNQDELVGRA RVSQGAGWSL Retaclgksy aqmwqlmyfh rrdlrlaana icSAVPVDWV PTSRTTWSIH AHHQWmtted mlsvwnrvwI EENPWMEDKT HVSSWEDVPY LGKREDRWCG SLIGLTARAt watniqvain qvrrlignen yldfmtsmkR FKNESDPEGA LW
>P17763_HOTLOOPS
1-26, 33-43, 171-179, 194-218, 309-322, 328-336, 343-370, 545-556, 617-645, 874-889, 1062-1098, 1126-1135, 1189-1197, 1409-1430, 1475-1486, 1576-1594, 1643-1654, 1665-1680, 1709-1718, 1849-1860, 1865-1881, 1888-1923, 1929-1947, 1981-2002, 2030-2039, 2044-2083, 2089-2096, 2384-2393, 2513-2577, 2638-2655, 2758-2768, 2835-2866, 2873-2915, 2929-2945, 3063-3101, 3147-3161, 3227-3239, 3314-3324, 3346-3353, 3377-3392
MNNQRKKTGR PSFNMLKRAR NRVSTVsqla krFSKGLLSG QGPmklvmaf iaflrflaip ptagilarwg sfkkngaikv lrgfkkeisn mlnimnrrkr svtmllmllp talafhlttr ggephmivsk qergksllfk tsagvnmctl iamdlgelce dtmtykcpri TETEPDDVDc wcnatetwvt ygtCSQTGEH RRDKRSVALA PHVGLGLEtr tetwmssega wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtpsma mrcvgignrd fveglsgatw vdvvlehgSC VTTMAKDKPT LDiellkTEV TNPAVLrklc ieAKISNTTT DSRCPTQGEA TLVEEQDTNF vcrrtfvdrg wgngcglfgk gslitcakfk cvtklegkiv qyenlkysvi vtvhtgdqhq vgnettehgt tatitpqapt seiqltdyga ltldcsprtg ldfnemvllt mekkswlvhk qwfldlplpw tsgastsqet wnrqdllvtf ktahakkqev vvlgsqegam htalTGATEI QTSGTTtifa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkyegtd apckipFSSQ DEKGVTQNGR LITANPIVTD KEKPVnieae ppfgesyivv gagekalkls wfkkgssigk mfeatargar rmailgdtaw dfgsiggvft svgklihqif gtaygvlfsg vswtmkigig illtwlglns rstslsmtci avgmvtlylg vmvqadsgcv inwkgrelkc gsgifvtnev htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdvsg ilaQGKKMIR PQPMEHKYSw kswgkakiig advqnttfii dgpntpecpd nqrawniwev edygfgiftt niwlklrdsy tqvcdhrlms aaikdskavh admgywiese knetwklara sfievktciw pkshtlwsng vlesemiipk iyggpisqhn yrpgyftqta gpwhlgklel dfdlcegttv vVDEHCGNRG PSLRTTTVTG KTIHEWCCRS CTLPPLRFkg edgcwygmei rpvkekeenl vksmvSAGSG EVDSFslgll cisimieevm rsrwsrkmlm tgtlavflll tmgqltwndl irlcimvgAN ASDKMGMgtt ylalmatfrm rpmfavgllf rrltsrevll ltvglslvas velpnsleel gdglamgimm lklltdfqsh qlwatllslt fvkttfslhy awktmamils ivslfplcls ttsqkttwlp vllgslgckp ltmflitenk iwgrkswpln egimavgivs illssllknd vplagpliag gmliacyvis gssadlslek aaevsweeEA EHSGASHNIL VEVQDDGTMK ikdeerddtl tillkatlla isgvypmsip atlfvwyfwq kkkqRSGVLW DTPSPPever avlddgiyri lqrgllgrsq vgvgvfqegv fhtmwhvtrg avlmyqgkrl epswasvkkd lisygggwrf qgswnageev qviavEPGKN PKNVQTAPGT FKTPegevga ialdfkpgts gspivnregk ivglygngvv ttsgtyvsai aqAKASQEGP LPEIedevfr krnlTIMDLH PGSGKTRRYL paivreairr nvrtlvlapt rvvasemaEA LKGMPIRYqt tavksehtgk eivdlmchat ftmrllspvr vpnynmiimd eahftdpasi aargyistrv gmgeaaaifm tatppgsvea fpqsnaviqd eerdipersw nsgydwitdf pgktvwfvps iksgndiaNC LRKNGKRVVQ lsrkTFDTEY QKTKNNDWDY VvttdisEMG ANFRADRVID PRRCLKPVIL KDGPERVILA GPMpvtvaSA AQRRGRIGRN QNKEGDQyiy mgqplnnded hahwteakml ldnintpegi IPALFEPERE KSAAIDGEYR LRgearktfv elmrrgdlpv wlsykvaseG FQYSDRRWCf dgeRNNQVLE ENMDVEIWTK EGERKKLRPR WLDARTYSDP LALrefkeFA AGRRSVsgdl ileigklpqh ltqraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvtlfflsgr glgktsigll cviassallw masvephwia asiilefflm vllipepdrq rtpqdnqlay vvigllfmil taaanemgll ettkkdlgig haaaenhhha amldvdlhpa sawtlyavat tiitpmmrht ienttanisl taianqaail mgldkgwpis kmdigvplla lgcysqvnpl tltaavfmlv ahyaiigpgl qakatreaqk rtaAGIMKNP TVDgivaidl dpvvydakfe kqlgqimlli lctsqillmr ttwalcesit latgplttlw egspgkfwnt tiavsmanif rgsylagagl afslmkslgg grrgtgaqge tlgekwkrql nqLSKSEFNT YKRSGIIEVD RSEAKEGLKR GEPTKHAVSR GTAKLRWFVE RNLVKPEGKV IDLGCGRggw syycaglkkv tevkgytkgg pgheepipma tygwnlvkly sgkdvfftpp ekcdtllCDI GESSPNPTIE EGRTLrvlkm vepwlrgnqf cikilnpymp svvetleqmq rkhggmlvrn plsrnsthem ywvscgtgni vsavnmtsrm llnrftmahr kptyerdvdl gagtrhvAVE PEVANLDIig qrienikngh kstwhydedn pyktwayhgs yevkpsgsas smvngvvrll tkpwdvipmv tqiaMTDTTP FGQQRVFKEK VDTRTPKAKR GTAQIMevta rwLWGFLSRN KKPRICTREE FTRKVRSNAA IGAVFVDENQ WNSAKeaved erfwdlvhRE RELHKQGKCA TCVYNmmgkr ekklgefgka kgsraiwymw lgarflefea lgfmnedhwf srenslsgve geglhklgyi lrdiskipgg nmyaddtagw dtriteddlq neakitdime pehallatsi fkLTYQNKVV RVQRPAKNGT VMDVISRRDQ RGSGQVGTYG Lntftnmeaq lirqmesegi fspseletpn laervldwlk khgterLKRM AISGDDCVVK Piddrfatal talndmgkvr kdipqwepsk gwndwqqvpf cshhfhqlim kdgreivvpc rnqdelVGRA RVSQGAGWSl retaclgksy aqmwqlmyfh rrdlrlaana icsavpvdwv ptsrttwsih ahhqwmtted mlsvwnrvwi eenPWMEDKT HVSSwedvpy lgkredrwcg sliglTARAT WATniqvain qvrrlignen yldfmtSMKR FKNESDPEGA LW
>P17763_REM465
1-9, 194-205, 1396-1414, 2371-2381, 2490-2499, 2536-2550, 3383-3392
MNNQRKKTGr psfnmlkrar nrvstvsqla krfskgllsg qgpmklvmaf iaflrflaip ptagilarwg sfkkngaikv lrgfkkeisn mlnimnrrkr svtmllmllp talafhlttr ggephmivsk qergksllfk tsagvnmctl iamdlgelce dtmtykcpri tetepddvdc wcnatetwvt ygtCSQTGEH RRDKRsvala phvglgletr tetwmssega wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtpsma mrcvgignrd fveglsgatw vdvvlehgsc vttmakdkpt ldiellktev tnpavlrklc ieakisnttt dsrcptqgea tlveeqdtnf vcrrtfvdrg wgngcglfgk gslitcakfk cvtklegkiv qyenlkysvi vtvhtgdqhq vgnettehgt tatitpqapt seiqltdyga ltldcsprtg ldfnemvllt mekkswlvhk qwfldlplpw tsgastsqet wnrqdllvtf ktahakkqev vvlgsqegam htaltgatei qtsgtttifa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkyegtd apckipfssq dekgvtqngr litanpivtd kekpvnieae ppfgesyivv gagekalkls wfkkgssigk mfeatargar rmailgdtaw dfgsiggvft svgklihqif gtaygvlfsg vswtmkigig illtwlglns rstslsmtci avgmvtlylg vmvqadsgcv inwkgrelkc gsgifvtnev htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdvsg ilaqgkkmir pqpmehkysw kswgkakiig advqnttfii dgpntpecpd nqrawniwev edygfgiftt niwlklrdsy tqvcdhrlms aaikdskavh admgywiese knetwklara sfievktciw pkshtlwsng vlesemiipk iyggpisqhn yrpgyftqta gpwhlgklel dfdlcegttv vvdehcgnrg pslrtttvtg ktihewccrs ctlpplrfkg edgcwygmei rpvkekeenl vksmvsagsg evdsfslgll cisimieevm rsrwsrkmlm tgtlavflll tmgqltwndl irlcimvgan asdkmgmgtt ylalmatfrm rpmfavgllf rrltsrevll ltvglslvas velpnsleel gdglamgimm lklltdfqsh qlwatllslt fvkttfslhy awktmamils ivslfplcls ttsqkttwlp vllgslgckp ltmflitenk iwgrkswpln egimavgivs illssllknd vplagpliag gmliacyvis gssadLSLEK AAEVSWEEEA EHSGashnil vevqddgtmk ikdeerddtl tillkatlla isgvypmsip atlfvwyfwq kkkqrsgvlw dtpsppever avlddgiyri lqrgllgrsq vgvgvfqegv fhtmwhvtrg avlmyqgkrl epswasvkkd lisygggwrf qgswnageev qviavepgkn pknvqtapgt fktpegevga ialdfkpgts gspivnregk ivglygngvv ttsgtyvsai aqakasqegp lpeiedevfr krnltimdlh pgsgktrryl paivreairr nvrtlvlapt rvvasemaea lkgmpiryqt tavksehtgk eivdlmchat ftmrllspvr vpnynmiimd eahftdpasi aargyistrv gmgeaaaifm tatppgsvea fpqsnaviqd eerdipersw nsgydwitdf pgktvwfvps iksgndianc lrkngkrvvq lsrktfdtey qktknndwdy vvttdisemg anfradrvid prrclkpvil kdgpervila gpmpvtvasa aqrrgrigrn qnkegdqyiy mgqplnnded hahwteakml ldnintpegi ipalfepere ksaaidgeyr lrgearktfv elmrrgdlpv wlsykvaseg fqysdrrwcf dgernnqvle enmdveiwtk egerkklrpr wldartysdp lalrefkefa agrrsvsgdl ileigklpqh ltqraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvtlfflsgr glgktsigll cviassallw masvephwia asiilefflm vllipepdrq rtpqdnqlay vvigllfmil taaanemgll ettkkdlgig haaaenhhha amldvdlhpa sawtlyavat tiitpmmrht ienttanisl taianqaail mgldkgwpis kmdigvplla lgcysqvnpl tltaavfmlv ahyaiigpgl QAKATREAQK Rtaagimknp tvdgivaidl dpvvydakfe kqlgqimlli lctsqillmr ttwalcesit latgplttlw egspgkfwnt tiavsmanif rgsylagagl afslmkslgG GRRGTGAQGe tlgekwkrql nqlsksefnt ykrsgiievd rseakEGLKR GEPTKHAVSR gtaklrwfve rnlvkpegkv idlgcgrggw syycaglkkv tevkgytkgg pgheepipma tygwnlvkly sgkdvfftpp ekcdtllcdi gesspnptie egrtlrvlkm vepwlrgnqf cikilnpymp svvetleqmq rkhggmlvrn plsrnsthem ywvscgtgni vsavnmtsrm llnrftmahr kptyerdvdl gagtrhvave pevanldiig qrienikngh kstwhydedn pyktwayhgs yevkpsgsas smvngvvrll tkpwdvipmv tqiamtdttp fgqqrvfkek vdtrtpkakr gtaqimevta rwlwgflsrn kkprictree ftrkvrsnaa igavfvdenq wnsakeaved erfwdlvhre relhkqgkca tcvynmmgkr ekklgefgka kgsraiwymw lgarflefea lgfmnedhwf srenslsgve geglhklgyi lrdiskipgg nmyaddtagw dtriteddlq neakitdime pehallatsi fkltyqnkvv rvqrpakngt vmdvisrrdq rgsgqvgtyg lntftnmeaq lirqmesegi fspseletpn laervldwlk khgterlkrm aisgddcvvk piddrfatal talndmgkvr kdipqwepsk gwndwqqvpf cshhfhqlim kdgreivvpc rnqdelvgra rvsqgagwsl retaclgksy aqmwqlmyfh rrdlrlaana icsavpvdwv ptsrttwsih ahhqwmtted mlsvwnrvwi eenpwmedkt hvsswedvpy lgkredrwcg sligltarat watniqvain qvrrlignen yldfmtsmkr fkNESDPEGA LW
| JOB-ID | P17763_180248ZivsSH8AAQEAAHG6rBcAAABI |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P17763 |
| Description | sp|P17763|POLG_DEN1W Genome polyprotein OS=Dengue virus type 1 (strain Nauru/West Pac/1974) OX=11059 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 3392 |
| Download predictions | smoothed scores raw scores |