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>P19811_LOOPS
1-55, 63-72, 119-175, 188-197, 202-298, 304-367, 379-465, 496-505, 519-528, 551-558, 620-635, 650-673, 683-763, 774-795, 802-831, 849-899, 970-978, 999-1009, 1031-1093, 1136-1171, 1178-1251, 1264-1274, 1285-1295, 1302-1315, 1323-1331, 1361-1388, 1413-1420, 1443-1452, 1527-1536, 1541-1598, 1608-1641, 1672-1701, 1718-1750, 1772-1797, 1816-1852, 1863-1910, 1918-1962, 1970-1984, 1998-2034, 2093-2131, 2169-2186, 2203-2210, 2237-2253, 2263-2295, 2309-2316, 2328-2337, 2347-2359, 2377-2442, 2447-2454, 2462-2476, 2487-2507, 2521-2536, 2549-2557, 2567-2617, 2626-2664, 2677-2702, 2709-2745, 2754-2766, 2775-2792, 2814-2844, 2849-2884, 2894-2947, 2960-2991, 3015-3028, 3072-3099, 3109-3120, 3156-3175
MATFSATGFG GSFVRDWSLD LPDACEHGAG LCCEVDGSTL CAECFRGCEG MEQCPglfmg llKLASPVPV GHkfligwyr aakvtgrynf lellqhpafa qlrvvdarla ieeasvfiST DHASAKRFPG ARFALTPVYA NAWVVSPAAN SLIVTTDQEQ DGFCWLKLLP PDRREaglrl yynhyreQRT GWLSKTGlrl wLGDLGLGIN ASSGGLKFHI MRGSPQRAWH ITTRSCKLKS YYVCDISEAD WSCLPAGNYG GYNPPGDGAC GYRCLAFMNG ATVVSAGCSS DLWCDDELay rvfQLSPTFT VTIPGGRVCP NAKYAMICDK QHWRVKRAKG VGLCLDESCF RGICNCQRMS GPPPAPVsaa vldhileaAT FGNVRVVTPE GQPRPVPAPR VRPSANSSGD VKDPAPVPPV PKPRTKLATP NPTQAPIPAP RTRLQGASTQ EPLASAGVAS DSAPKwrvak tvyssaerfr telvqrarsv gdvlvQALPL KTPAVqrytm tlkmmrsrFS WHCDVWYPla viacllpiwp slalllsfai GLIPSVGNnv vltallvssa nyvasmdhqc egaaclalle eehyyravrw rpitgalslv lnllgqvgyV ARSTFDAAYV PCTVFdlcsf ailylcrnrC WRCFGRCVRV GPATHVLGST GQRvsklali dlCDHFSKPT IDVVGMATGW SGCYTGTAAM ERQCASTVDP HSFDQKKAGA TVYLTPPVNS GSALQCLNVM WKRPIGSTVL GEQtgavvta vksISFSPPC CVSTTLPTRP GVTVVdhaly nRLTASGVDP ALLRVGQGDF LKLNPGFRLI Ggwiygicyf vlvvvstfTC LPIKCGIGTR DPFCRRVFSV PVTKTQEHCH AGMCASAEGI SLDSLGLTQl qsywiaavts glvillvchr laisaldllt lasplvllvf pwasvgllla cslagaavki qllatlfvnL FFPQATLVtm gywacvaala vyslmglrVK VNVPMCVTPa hflllarsag qsreqmlrvs AAAPTNSLLG VARDCYVTGT TRLYIPKEGG MVFEGLFRSP KARGNVGFVA GSSYGTGSVW TRNnevvvlt ashvvgranm atlkigdaml tltfkkngdf aeavtTQSEL PGNWPQLHFA QPTTGPASWC TATGDEEGLL SgevclaWTT SGDSGSAVVQ GDAVVGVHTG SNTSGVAYVT TPSGKLLGAD TVTLSSLSKH FTGPLTSIPK DIPDNIIADV Davprslaml idgLSNRESS LSGPqlllia cfmwSYLNQP AYLPYvlgff aANFFLPKSV GRPVVtgllw lcCLFTPLSM Rlclfhlvca tvtgnvislw fyitaagtsy LSEMWFGGYP TMLFVPRFLV YQFPGWAIgt vlavcsitml aaalghtlll dvFSASGRFD rtfmmkyfle ggvkesvtas vtRAYGKPIT QEsltatlaa ltdddfqfls dvldcravrs amnlraalts fqvaqyrnil naslqvdrda arsrrlmakl adfaveQEVT AGDRVVvidg LDRMAHFKDD LVLVPLTTKV VGGSRCTICD VVKEEANDTP VKPMPSRRRR KGLPKGAQle wdrhqeeKRN AGDDDFAVSN DYVKRVPKYW DPSDTRGTTV Kiagttyqkv vdysgnvhyv ehqedlldyv lGKGSYEGLD QDKVLDLTNM LKVDPTELSS Kdkakarqla hllldlaNPV EAVNQLNLRA PHIFPGDVGR RTFADSKDKG fvalhsrtmf laardflfni kFVCDEEFTK TPKDTLLGYV RACPGYWfif rrthrslida ywdsmECVYA LPTISDFDVS PGDVAVTGER WDFESPGGGR AKrltadlvh afQGFHGASY SYDDKVAAAV SGDPYRSDGV LYNTRWGNIP YSVPTNALEA tacyragCEA VTDGTNVIAT IGPFPEQQPI PDIPKSVLDN CADISCDAFI APaaetalcG DLEKYNLSTQ GFVLpsvfsm vraylkeEIG DAPPLYLPST VPSKNSQAGI NGAEFPTKSL QSYCliddmv sqsmksnlqt atmatckrqy cskykirsil gtnnyiglgl raclsgvtaa fqKAGKDGSP IYLGKSKFDP IPAPDKYCLE TDLESCDRST Palvrwfatn lifelagqpe lvhsyvlncc hdlvvagsVA FTKRGGLSSG DPITSIsnti yslvlytqhm llCGLEGYFP eiaekyldgs lelrdmfkyv rvyiysDDVV LTTPNQHYAA SFDrwvphlq alLGFKVDPK KTVNTSSPSF LGCRFKQVDG KCYLAslqdr vtrsllyhIG AKNPSEyyea avsifkdSII CCDEDWWtdl hrrisgAART DGVEFPTIEm ltsfrtkqye savctvCGAA PVAKSACGGW FCGNCVPYHA GHCHTTSLFA NCGHDIMYRS TYCTMCEGSP KQMVPKVPHP ILdhllCHID YGSKeeltlv vADGRTTSPP GRYKVGhkvv avvadvGGNI VFGCGPGSHI AVPLQDTlkg vvvnkalkna AASEYVEGPP GSGKTFhlvk dvlavvgsAT LVVPTHAsml dcinklKQAG ADPYFVVPKY TVLDFPRPGS GNITVRLPQV GTSEGETFVD EVAYFSPvdl ariltQGRVK GYGDLNQLGC VGPASVPRNL WLRHFVSLEP LRVChrfgaa vcdlikGIYP YYEPAPHTTK VVFVPNPDFE KGvvitayHK DRGLGHRTID SIQGCTFPVV TLRLPTPQSL TRPRAvvavt rasQELYIYD PFDQLSgllk ftkeAEAQDL IHGPPTACHL GQeidlwsne gleyykevnl lytHVPIKDG VIHSYPNCGP ACGWEKQSNK ISCLprvaQN LGYHYSPDLP GFCPIPKELA EHWPVVSNDR YPNClqitlq qvcELSKPCS AGYMVGQSVF VQTPGVTSYW LTEWVDGKAR ALPDSLFSSG RFETNSRafl deaeekfaaA HPHACLGEIN KSTVGGSHFI FSQYLPPLLP Adavalvgas lagkaakaac svvdVYAPSF EPYLHPETls rvykimidfk pcrlmvwrna tfyvqegvda vtsalaavsk lIKVPANEPV SFHVASGYRT NALVAPQAKi sigayaaeWA LSTEPPPAGY aivrryivkr llsstevflc rrgvvsstsv qticaLEGCK PLFNFLQIGS VIGPV
>P19811_HOTLOOPS
1-13, 118-127, 186-195, 386-440, 455-466, 492-506, 663-673, 1031-1046, 1082-1093, 1233-1246, 1522-1534, 1545-1619, 1624-1642, 1694-1702, 1729-1739, 1779-1789, 1839-1850, 2175-2184, 2276-2287, 2347-2357, 2465-2475, 2733-2744, 3020-3028, 3158-3175
MATFSATGFG GSFvrdwsld lpdacehgag lccevdgstl caecfrgceg meqcpglfmg llklaspvpv ghkfligwyr aakvtgrynf lellqhpafa qlrvvdarla ieeasvfIST DHASAKRfpg arfaltpvya nawvvspaan slivttdqeq dgfcwlkllp pdrreaglrl yynhyREQRT GWLSKtglrl wlgdlglgin assgglkfhi mrgspqrawh ittrscklks yyvcdisead wsclpagnyg gynppgdgac gyrclafmng atvvsagcss dlwcddelay rvfqlsptft vtipggrvcp nakyamicdk qhwrvkrakg vglcldescf rgicncqrms gpppapvsaa vldhileaat fgnvrVVTPE GQPRPVPAPR VRPSANSSGD VKDPAPVPPV PKPRTKLATP NPTQAPIPAP rtrlqgastq eplaSAGVAS DSAPKWrvak tvyssaerfr telvqrarsv gDVLVQALPL KTPAVQrytm tlkmmrsrfs whcdvwypla viacllpiwp slalllsfai glipsvgnnv vltallvssa nyvasmdhqc egaaclalle eehyyravrw rpitgalslv lnllgqvgyv arstfdaayv pctvfdlcsf ailylcrnrc wrcfgrcvrv gpATHVLGST GQRvsklali dlcdhfskpt idvvgmatgw sgcytgtaam erqcastvdp hsfdqkkaga tvyltppvns gsalqclnvm wkrpigstvl geqtgavvta vksisfsppc cvsttlptrp gvtvvdhaly nrltasgvdp allrvgqgdf lklnpgfrli ggwiygicyf vlvvvstftc lpikcgigtr dpfcrrvfsv pvtktqehch agmcasaegi sldslgltql qsywiaavts glvillvchr laisaldllt lasplvllvf pwasvgllla cslagaavki qllatlfvnl ffpqatlvtm gywacvaala vyslmglrvk vnvpmcvtpa hflllarsag qsreqmlrvs AAAPTNSLLG VARDCYvtgt trlyipkegg mvfeglfrsp kargnvgfva gSSYGTGSVW TRNnevvvlt ashvvgranm atlkigdaml tltfkkngdf aeavttqsel pgnwpqlhfa qpttgpaswc tatgdeegll sgevclawtt sgdsgsavvq gdavvgvhtg sntsgvayvt tpsgkllgad tvtlsslskh ftGPLTSIPK DIPDNIiadv davprslaml idglsnress lsgpqlllia cfmwsylnqp aylpyvlgff aanfflpksv grpvvtgllw lcclftplsm rlclfhlvca tvtgnvislw fyitaagtsy lsemwfggyp tmlfvprflv yqfpgwaigt vlavcsitml aaalghtlll dvfsasgrfd rtfmmkyfle ggvkesvtas vtraygkpit qesltatlaa ltdddfqfls dvldcravrs amnlraalts fqvaqyrnil naslqvdrda arsrrlmakl aDFAVEQEVT AGDRvvvidg ldrmAHFKDD LVLVPLTTKV VGGSRCTICD VVKEEANDTP VKPMPSRRRR KGLPKGAQLE WDRHQEEKRN AGDDDFAVSn dyvKRVPKYW DPSDTRGTTV KIagttyqkv vdysgnvhyv ehqedlldyv lgkgsyegld qdkvldltnm lkvDPTELSS KDkakarqla hllldlanpv eavnqlnlRA PHIFPGDVGr rtfadskdkg fvalhsrtmf laardflfni kfvcdeefTK TPKDTLLGYv racpgywfif rrthrslida ywdsmecvya lptisdfdvs pgdvavtgER WDFESPGGGR akrltadlvh afqgfhgasy syddkvaaav sgdpyrsdgv lyntrwgnip ysvptnalea tacyragcea vtdgtnviat igpfpeqqpi pdipksvldn cadiscdafi apaaetalcg dlekynlstq gfvlpsvfsm vraylkeeig dapplylpst vpsknsqagi ngaefptksl qsycliddmv sqsmksnlqt atmatckrqy cskykirsil gtnnyiglgl raclsgvtaa fqkagkdgsp iylgkskfdp ipapdkycle tdlescdrst palvrwfatn lifelagqpe lvhsyvlncc hdlvvagsva ftkrGGLSSG DPITsisnti yslvlytqhm llcglegyfp eiaekyldgs lelrdmfkyv rvyiysddvv lttpnqhyaa sfdrwvphlq allgfkvdpk ktvntSSPSF LGCRFKQvdg kcylaslqdr vtrsllyhig aknpseyyea avsifkdsii ccdedwwtdl hrrisgAART DGVEFPTiem ltsfrtkqye savctvcgaa pvaksacggw fcgncvpyha ghchttslfa ncghdimyrs tyctmcegsp kqmvpkvphp ildhllchid ygskeeltlv vadgRTTSPP GRYKVghkvv avvadvggni vfgcgpgshi avplqdtlkg vvvnkalkna aaseyvegpp gsgktfhlvk dvlavvgsat lvvpthasml dcinklkqag adpyfvvpky tvldfprpgs gnitvrlpqv gtsegetfvd evayfspvdl ariltqgrvk gygdlnqlgc vgpasvprnl wlrhfvslep lrvchrfgaa vcdlikgiyp yyepaphttk vvfvpnpdfe kgvvitayhk drglghrtid siqgctfpvv tlRLPTPQSL TRPRavvavt rasqelyiyd pfdqlsgllk ftkeaeaqdl ihgpptachl gqeidlwsne gleyykevnl lythvpikdg vihsypncgp acgwekqsnk isclprvaqn lgyhyspdlp gfcpipkela ehwpvvsndr ypnclqitlq qvcelskpcs agymvgqsvf vqtpgvtsyw ltewvdgkar alpdslfssg rfetnsrafl deaeekfaaa hphaclgein kstvggshfi fsqylppllp adavalvgas lagkaakaac svvdvyapsF EPYLHPETls rvykimidfk pcrlmvwrna tfyvqegvda vtsalaavsk likvpanepv sfhvasgyrt nalvapqaki sigayaaewa lstepppagy aivrryivkr llsstevflc rrgvvsstsv qticaleGCK PLFNFLQIGS VIGPV
>P19811_REM465
1-8, 391-416, 443-464, 1577-1595
MATFSATGfg gsfvrdwsld lpdacehgag lccevdgstl caecfrgceg meqcpglfmg llklaspvpv ghkfligwyr aakvtgrynf lellqhpafa qlrvvdarla ieeasvfist dhasakrfpg arfaltpvya nawvvspaan slivttdqeq dgfcwlkllp pdrreaglrl yynhyreqrt gwlsktglrl wlgdlglgin assgglkfhi mrgspqrawh ittrscklks yyvcdisead wsclpagnyg gynppgdgac gyrclafmng atvvsagcss dlwcddelay rvfqlsptft vtipggrvcp nakyamicdk qhwrvkrakg vglcldescf rgicncqrms gpppapvsaa vldhileaat fgnvrvvtpe GQPRPVPAPR VRPSANSSGD VKDPAPvppv pkprtklatp nptqapipap rtRLQGASTQ EPLASAGVAS DSAPkwrvak tvyssaerfr telvqrarsv gdvlvqalpl ktpavqrytm tlkmmrsrfs whcdvwypla viacllpiwp slalllsfai glipsvgnnv vltallvssa nyvasmdhqc egaaclalle eehyyravrw rpitgalslv lnllgqvgyv arstfdaayv pctvfdlcsf ailylcrnrc wrcfgrcvrv gpathvlgst gqrvsklali dlcdhfskpt idvvgmatgw sgcytgtaam erqcastvdp hsfdqkkaga tvyltppvns gsalqclnvm wkrpigstvl geqtgavvta vksisfsppc cvsttlptrp gvtvvdhaly nrltasgvdp allrvgqgdf lklnpgfrli ggwiygicyf vlvvvstftc lpikcgigtr dpfcrrvfsv pvtktqehch agmcasaegi sldslgltql qsywiaavts glvillvchr laisaldllt lasplvllvf pwasvgllla cslagaavki qllatlfvnl ffpqatlvtm gywacvaala vyslmglrvk vnvpmcvtpa hflllarsag qsreqmlrvs aaaptnsllg vardcyvtgt trlyipkegg mvfeglfrsp kargnvgfva gssygtgsvw trnnevvvlt ashvvgranm atlkigdaml tltfkkngdf aeavttqsel pgnwpqlhfa qpttgpaswc tatgdeegll sgevclawtt sgdsgsavvq gdavvgvhtg sntsgvayvt tpsgkllgad tvtlsslskh ftgpltsipk dipdniiadv davprslaml idglsnress lsgpqlllia cfmwsylnqp aylpyvlgff aanfflpksv grpvvtgllw lcclftplsm rlclfhlvca tvtgnvislw fyitaagtsy lsemwfggyp tmlfvprflv yqfpgwaigt vlavcsitml aaalghtlll dvfsasgrfd rtfmmkyfle ggvkesvtas vtraygkpit qesltatlaa ltdddfqfls dvldcravrs amnlraalts fqvaqyrnil naslqvdrda arsrrlmakl adfaveqevt agdrvvvidg ldrmahfkdd lvlvplttkv vggsrcticd vvkeeaNDTP VKPMPSRRRR KGLPKgaqle wdrhqeekrn agdddfavsn dyvkrvpkyw dpsdtrgttv kiagttyqkv vdysgnvhyv ehqedlldyv lgkgsyegld qdkvldltnm lkvdptelss kdkakarqla hllldlanpv eavnqlnlra phifpgdvgr rtfadskdkg fvalhsrtmf laardflfni kfvcdeeftk tpkdtllgyv racpgywfif rrthrslida ywdsmecvya lptisdfdvs pgdvavtger wdfespgggr akrltadlvh afqgfhgasy syddkvaaav sgdpyrsdgv lyntrwgnip ysvptnalea tacyragcea vtdgtnviat igpfpeqqpi pdipksvldn cadiscdafi apaaetalcg dlekynlstq gfvlpsvfsm vraylkeeig dapplylpst vpsknsqagi ngaefptksl qsycliddmv sqsmksnlqt atmatckrqy cskykirsil gtnnyiglgl raclsgvtaa fqkagkdgsp iylgkskfdp ipapdkycle tdlescdrst palvrwfatn lifelagqpe lvhsyvlncc hdlvvagsva ftkrgglssg dpitsisnti yslvlytqhm llcglegyfp eiaekyldgs lelrdmfkyv rvyiysddvv lttpnqhyaa sfdrwvphlq allgfkvdpk ktvntsspsf lgcrfkqvdg kcylaslqdr vtrsllyhig aknpseyyea avsifkdsii ccdedwwtdl hrrisgaart dgvefptiem ltsfrtkqye savctvcgaa pvaksacggw fcgncvpyha ghchttslfa ncghdimyrs tyctmcegsp kqmvpkvphp ildhllchid ygskeeltlv vadgrttspp grykvghkvv avvadvggni vfgcgpgshi avplqdtlkg vvvnkalkna aaseyvegpp gsgktfhlvk dvlavvgsat lvvpthasml dcinklkqag adpyfvvpky tvldfprpgs gnitvrlpqv gtsegetfvd evayfspvdl ariltqgrvk gygdlnqlgc vgpasvprnl wlrhfvslep lrvchrfgaa vcdlikgiyp yyepaphttk vvfvpnpdfe kgvvitayhk drglghrtid siqgctfpvv tlrlptpqsl trpravvavt rasqelyiyd pfdqlsgllk ftkeaeaqdl ihgpptachl gqeidlwsne gleyykevnl lythvpikdg vihsypncgp acgwekqsnk isclprvaqn lgyhyspdlp gfcpipkela ehwpvvsndr ypnclqitlq qvcelskpcs agymvgqsvf vqtpgvtsyw ltewvdgkar alpdslfssg rfetnsrafl deaeekfaaa hphaclgein kstvggshfi fsqylppllp adavalvgas lagkaakaac svvdvyapsf epylhpetls rvykimidfk pcrlmvwrna tfyvqegvda vtsalaavsk likvpanepv sfhvasgyrt nalvapqaki sigayaaewa lstepppagy aivrryivkr llsstevflc rrgvvsstsv qticalegck plfnflqigs vigpv
| JOB-ID | P19811_100146Zit7in8AAQEAAHG528gAAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P19811 |
| Description | sp|P19811|RPOA_EAVBU Replicase polyprotein 1ab OS=Equine arteritis virus (strain Bucyrus) OX=299386 GN=rep PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 3175 |
| Download predictions | smoothed scores raw scores |