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>P20871_LOOPS
42-63, 69-82, 112-157, 176-191, 197-278, 291-319, 357-408, 423-470, 479-493, 517-526, 581-608, 701-739
mrvkgirkny qhlwkggill lgtlmicsav eklwvtvyyg vPVWKETTTT LFCASDAKAY DTEvhnvwAT HACVPTDPNP QEvvlenvte dfnmwknnmv eqmqedvinl wDQSLKPCVK LTPLCVTLNC KDVNATNTTS SSEGMMERGE IKNCSFNitk sirdkvqkey alfykLDVVP IDNKNNTKYR LiscntSVIT QACPKVSFEP IPIHYCAPAG FAILKCNNKT FNGKGQCKNV STVQCTHGIR PVVSTQLLLN GSLAEEKVVI RSDNFTDNak tiivqlnesv KINCTRPSNN TRKSIHIGPG RAFYTTGEIi gdirqahcni sraqwnntlk qiveklreqf nnktivFTHS SGGDPEIVMH SFNCGGEFFY CNSTQLFNST WNDTEKSSGT EGNDTIILpc rikqiinmwq evGKAMYAPP IKGQIRCSSN ITGLLLTRDG GKNESEIEIF RPGGGDMRDN wrselykyKV VKIEPLGVAP TKAkrrvvqr ekravgigal flgflgAAGS TMGARSmtlt vqarqllsgi vqqqnnllra ieaqqhmlql tvwgikqlqa rvlaverylk DQQLMGIWGC SGKLICTTAV PWNTSWSNks ldsiwnnmtw mewekeieny tntiytliee sqiqqekneq elleldkwas lwnwfgitkw lwyikifimi vggliglriv fsvlsivnrv RQGYSPLSFQ TLLPATRGPD RPEGIEEEGG ERDRDRSGQl vngflaliwv dlrslflfsy hrlrdllltv trivellgrr gweilkywwn llqywsqelk nsavsllnat aiavaegtdr iievvqrvyr ailhiptrir qglerall
>P20871_HOTLOOPS
1-11, 72-80, 124-157, 175-186, 267-278, 286-310, 396-407, 446-470, 480-498, 702-738, 832-848
MRVKGIRKNY Qhlwkggill lgtlmicsav eklwvtvyyg vpvwketttt lfcasdakay dtevhnvwat hACVPTDPNP qevvlenvte dfnmwknnmv eqmqedvinl wdqslkpcvk ltpLCVTLNC KDVNATNTTS SSEGMMERGE IKNCSFNitk sirdkvqkey alfyKLDVVP IDNKNNtkyr liscntsvit qacpkvsfep ipihycapag failkcnnkt fngkgqcknv stvqcthgir pvvstqllln gslaeeKVVI RSDNFTDNak tiivqLNESV KINCTRPSNN TRKSIHIGPG rafyttgeii gdirqahcni sraqwnntlk qiveklreqf nnktivfths sggdpeivmh sfncggeffy cnstqlfnst wndteKSSGT EGNDTIIlpc rikqiinmwq evgkamyapp ikgqircssn itgllLTRDG GKNESEIEIF RPGGGDMRDN wrselykykV VKIEPLGVAP TKAKRRVVqr ekravgigal flgflgaags tmgarsmtlt vqarqllsgi vqqqnnllra ieaqqhmlql tvwgikqlqa rvlaverylk dqqlmgiwgc sgklicttav pwntswsnks ldsiwnnmtw mewekeieny tntiytliee sqiqqekneq elleldkwas lwnwfgitkw lwyikifimi vggliglriv fsvlsivnrv rQGYSPLSFQ TLLPATRGPD RPEGIEEEGG ERDRDRSGql vngflaliwv dlrslflfsy hrlrdllltv trivellgrr gweilkywwn llqywsqelk nsavsllnat aiavaegtdr iievvqrvyr aILHIPTRIR QGLERALL
>P20871_REM465
393-400, 490-499, 718-735
mrvkgirkny qhlwkggill lgtlmicsav eklwvtvyyg vpvwketttt lfcasdakay dtevhnvwat hacvptdpnp qevvlenvte dfnmwknnmv eqmqedvinl wdqslkpcvk ltplcvtlnc kdvnatntts ssegmmerge ikncsfnitk sirdkvqkey alfykldvvp idnknntkyr liscntsvit qacpkvsfep ipihycapag failkcnnkt fngkgqcknv stvqcthgir pvvstqllln gslaeekvvi rsdnftdnak tiivqlnesv kinctrpsnn trksihigpg rafyttgeii gdirqahcni sraqwnntlk qiveklreqf nnktivfths sggdpeivmh sfncggeffy cnstqlfnst wnDTEKSSGT egndtiilpc rikqiinmwq evgkamyapp ikgqircssn itgllltrdg gkneseieif rpgggdmrdn wrselykykv vkieplgvaP TKAKRRVVQr ekravgigal flgflgaags tmgarsmtlt vqarqllsgi vqqqnnllra ieaqqhmlql tvwgikqlqa rvlaverylk dqqlmgiwgc sgklicttav pwntswsnks ldsiwnnmtw mewekeieny tntiytliee sqiqqekneq elleldkwas lwnwfgitkw lwyikifimi vggliglriv fsvlsivnrv rqgysplsfq tllpatrGPD RPEGIEEEGG ERDRDrsgql vngflaliwv dlrslflfsy hrlrdllltv trivellgrr gweilkywwn llqywsqelk nsavsllnat aiavaegtdr iievvqrvyr ailhiptrir qglerall
| JOB-ID | P20871_154958ZjpNpn8AAQEAAB3f4KcAAABX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P20871 |
| Description | sp|P20871|ENV_HV1JR Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) OX=11688 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 848 |
| Download predictions | smoothed scores raw scores |