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>P20872_LOOPS
32-63, 95-245, 257-307, 315-334, 350-377, 403-414, 425-442, 451-462, 475-507, 587-614, 650-662, 698-746
mcgrnqlfva sllasacliy cvqyvtvfyg vPVWRNASIP LFCATKNRDT WGTIQCLPDN DDYqeialnv teafdawnnt vteqavedvw slfeTSIKPC VKLTPLCVAM RCNSTTAKNT TSTPTTTTTA NTTIGENSSC IRTDNCTGLG EEEMVDCQFN MTGLERDKKK LYNETWYSKD VVCESNDTKK EKTCYMNHCN TSVITESCDK HYWDTMRFRY CAPPGFALLR CNDTNYSGFE PNCSKvvaat ctrmmeTQTS TWFGFNGTRA ENRTYIYWHG RDNRTIISLN KFYNLTVHCK RPGNKTVvpi tlmsGLVFHS QPINRRPRQA WCWFkgewke amkevkltlA KHPRYKGTND TEKIRFIAPG ERSDPEVaym wtncrgefly cnmtwflnwv enRTNQTQHN YVPChikqii ntwhKVGKNV YLPPREGQLT CNstvtsiia NIDGGENQTN ITfsaevael yrleLGDYKL IEVTPIGFAP TPVKRYSSAP VRNKRGVfvl gflgflttag aamgaasltl saqsrtllag ivqqqqqlld vvkrqqemlr ltvwgtknlq arvtaiekyl kdqaqlNSWG CAFRQVCHTT VPWVNDTLTP DWNNmtwqew eqrirnlean isesleqaqi qqeknmyelQ KLNSWDVFGN WFdltswiky iqygvyivvg iivlriviyv vqmlsrlRKG YRPVFSSPPA YFQQIHIHKD REQPAREETE EDVGNSVGDN WWPWPIryih flirqlirll nrlynicrdl lsrsfqtlql isqslrralt avrdwlrfnt aylqyggewi qeafrafara tgetltnawr gfwgtlgqig rgilavprri rqgaeiall
>P20872_HOTLOOPS
114-141, 164-205, 258-269, 317-326, 349-376, 483-503, 562-569, 734-743, 840-847
mcgrnqlfva sllasacliy cvqyvtvfyg vpvwrnasip lfcatknrdt wgtiqclpdn ddyqeialnv teafdawnnt vteqavedvw slfetsikpc vkltplcvam rcnSTTAKNT TSTPTTTTTA NTTIGENSSC Irtdnctglg eeemvdcqfn mtgLERDKKK LYNETWYSKD VVCESNDTKK EKTCYMNHCN TSVITescdk hywdtmrfry cappgfallr cndtnysgfe pncskvvaat ctrmmetQTS TWFGFNGTRa enrtyiywhg rdnrtiisln kfynltvhck rpgnktvvpi tlmsglVFHS QPINRRprqa wcwfkgewke amkevkltLA KHPRYKGTND TEKIRFIAPG ERSDPEvaym wtncrgefly cnmtwflnwv enrtnqtqhn yvpchikqii ntwhkvgknv ylppregqlt cnstvtsiia nidggenqtn itfsaevael yrlelgdykl ieVTPIGFAP TPVKRYSSAP VRNkrgvfvl gflgflttag aamgaasltl saqsrtllag ivqqqqqlld vvkrqqemlr lTVWGTKNLq arvtaiekyl kdqaqlnswg cafrqvchtt vpwvndtltp dwnnmtwqew eqrirnlean isesleqaqi qqeknmyelq klnswdvfgn wfdltswiky iqygvyivvg iivlriviyv vqmlsrlrkg yrpvfssppa yfqqihihkd reqpareete edvGNSVGDN WWPwpiryih flirqlirll nrlynicrdl lsrsfqtlql isqslrralt avrdwlrfnt aylqyggewi qeafrafara tgetltnawr gfwgtlgqiG RGILAVPrri rqgaeiall
>P20872_REM465
116-127, 720-735
mcgrnqlfva sllasacliy cvqyvtvfyg vpvwrnasip lfcatknrdt wgtiqclpdn ddyqeialnv teafdawnnt vteqavedvw slfetsikpc vkltplcvam rcnstTAKNT TSTPTTTtta nttigenssc irtdnctglg eeemvdcqfn mtglerdkkk lynetwyskd vvcesndtkk ektcymnhcn tsvitescdk hywdtmrfry cappgfallr cndtnysgfe pncskvvaat ctrmmetqts twfgfngtra enrtyiywhg rdnrtiisln kfynltvhck rpgnktvvpi tlmsglvfhs qpinrrprqa wcwfkgewke amkevkltla khprykgtnd tekirfiapg ersdpevaym wtncrgefly cnmtwflnwv enrtnqtqhn yvpchikqii ntwhkvgknv ylppregqlt cnstvtsiia nidggenqtn itfsaevael yrlelgdykl ievtpigfap tpvkryssap vrnkrgvfvl gflgflttag aamgaasltl saqsrtllag ivqqqqqlld vvkrqqemlr ltvwgtknlq arvtaiekyl kdqaqlnswg cafrqvchtt vpwvndtltp dwnnmtwqew eqrirnlean isesleqaqi qqeknmyelq klnswdvfgn wfdltswiky iqygvyivvg iivlriviyv vqmlsrlrkg yrpvfssppa yfqqihihkD REQPAREETE EDVGNsvgdn wwpwpiryih flirqlirll nrlynicrdl lsrsfqtlql isqslrralt avrdwlrfnt aylqyggewi qeafrafara tgetltnawr gfwgtlgqig rgilavprri rqgaeiall
| JOB-ID | P20872_181341Zi6R1X8AAQEAACaZYMkAAAAC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P20872 |
| Description | sp|P20872|ENV_HV2ST Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 2 subtype A (isolate ST) OX=11721 GN=env PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 859 |
| Download predictions | smoothed scores raw scores |