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>P27285_LOOPS
1-38, 55-103, 116-124, 134-222, 247-268, 277-308, 321-482, 489-549, 555-683, 721-738, 761-770, 806-821, 827-834, 842-908, 955-1121, 1127-1146, 1160-1169, 1176-1201
MNRGFFNMLG RRPFPAPTAM WRPRRRRQAA PMPARNGLas qiqqlttavs alviGQATRP QNPRPRPPPR QKKQAPKQPP KPKKPKPQEK KKKQPAKTKP GKRqrmalkl eadrlFDVKN EDGDvighal ameGKVMKPL HVKGTIDHPV LSKLKFTKSS AYDMEFAQLP VNMRSEAFTY TSEHPEGFYN WHHGAVQYSG GRFTIPRGVG GRGDSGRPIM DNsgrvvaiv lggadegtrt alsvvtWNSK GKTIKTTPEG TEEWSAAPlv tamcllGNVS FPCNRPPTCY TREPSRALDI LEENVNHEay dtllnailrc GSSGRSKRSV TDDFTLTSPY LGTCSYCHHT EPCFSPIKIE QVWDEADDNT IRIQTSAQFG YDKSGAASTN KYRYMSFEQD HTVKEGTMDD IKISTSGPCR RLSYKGYFLL AKCPPGDSVT VSIASSNSAT SCTMARKIKP KFVGREKYDL PPVHGKKIPC TVydrlkeTT AGYITMHRPG PHAYTSYLEE SSGKVYAKPP SGKNITYECK CGDYKTGTVT TRTEITGCTa ikqcVAYKSD QTKWVFNSPD LIRHADHTAQ GKLHLPFKLI PSTCMVPVAH APNVIHGFKH ISLQLDTDHL TLLTTRRLGA NPEPTTEWII GKTVRNFTVD RDGLEYIWGN HEPVRVYAQE SAPGDPHGWP HEIvqhyyhr hpvytilava saavammigv tvaalcacka RRECLTPYAL APNAVIPTsl allccvrsan aetftetmsy FWSNSQPFFW vqlciplaav ivlmrccscc lpflvvagay lakvdAYEHA TTVPNVPQIP YkalveRAGY APLNleitvm sSEVLPSTNQ EYITCKFTTV VPSPKVKCCG SLECQPAAHA DYTCKVFGGV YPFMWGGAQC FCDSENSQms eayvelsadc atdhaqaikv htaamkvglr ivygnttsfl dvyvNGVTPG TSKDLKVIAG PISASFTPFD HKVVIHRGLV YNYDFPEYGA MKPGVFGDIQ ATSLTSKDLI ASTDIRLLKP SAKNVHVPYT QAASGFEMWK NNSGRPLQET APFGCKIAVN PLRAVDCSYG NIPISIDIPN AAFIRTSDAP LVSTVKCDVS ECTYSADFGG MatlqyVSDR EGQCPVHSHS STATLQestv hvlekgavtV HFSTASPQAn fivslCGKKT TCNAECKPPA DHIVSTPHKN Dqefqaaisk tswswlfalf ggasslliig ltifacsmml tstrr
>P27285_HOTLOOPS
1-24, 57-106, 232-264, 322-333, 374-390, 400-419, 445-481, 492-500, 626-647, 811-820, 1025-1036
MNRGFFNMLG RRPFPAPTAM WRPRrrrqaa pmparnglas qiqqlttavs alvigqATRP QNPRPRPPPR QKKQAPKQPP KPKKPKPQEK KKKQPAKTKP GKRQRMalkl eadrlfdvkn edgdvighal amegkvmkpl hvkgtidhpv lsklkftkss aydmefaqlp vnmrseafty tsehpegfyn whhgavqysg grftiprgvg grgdsgrpim dnsgrvvaiv lGGADEGTRT ALSVVTWNSK GKTIKTTPEG TEEWsaaplv tamcllgnvs fpcnrpptcy trepsraldi leenvnheay dtllnailrc gSSGRSKRSV TDDftltspy lgtcsychht epcfspikie qvwdeaddnt iriQTSAQFG YDKSGAASTN kyrymsfeqD HTVKEGTMDD IKISTSGPCr rlsykgyfll akcppgdsvt vsiaSSNSAT SCTMARKIKP KFVGREKYDL PPVHGKKIPC Tvydrlkett aGYITMHRPG phaytsylee ssgkvyakpp sgknityeck cgdyktgtvt trteitgcta ikqcvayksd qtkwvfnspd lirhadhtaq gklhlpfkli pstcmvpvah apnvihgfkh islqldtdhl tllttRRLGA NPEPTTEWII GKTVRNFtvd rdgleyiwgn hepvrvyaqe sapgdphgwp heivqhyyhr hpvytilava saavammigv tvaalcacka rrecltpyal apnaviptsl allccvrsan aetftetmsy fwsnsqpffw vqlciplaav ivlmrccscc lpflvvagay lakvdayeha TTVPNVPQIP ykalveragy aplnleitvm ssevlpstnq eyitckfttv vpspkvkccg slecqpaaha dytckvfggv ypfmwggaqc fcdsensqms eayvelsadc atdhaqaikv htaamkvglr ivygnttsfl dvyvngvtpg tskdlkviag pisasftpfd hkvvihrglv ynydfpeyga mkpgvfgdiq atsltskdli astdIRLLKP SAKNVHvpyt qaasgfemwk nnsgrplqet apfgckiavn plravdcsyg nipisidipn aafirtsdap lvstvkcdvs ectysadfgg matlqyvsdr egqcpvhshs statlqestv hvlekgavtv hfstaspqan fivslcgkkt tcnaeckppa dhivstphkn dqefqaaisk tswswlfalf ggasslliig ltifacsmml tstrr
>P27285_REM465
58-103, 323-330, 1129-1144
mnrgffnmlg rrpfpaptam wrprrrrqaa pmparnglas qiqqlttavs alvigqaTRP QNPRPRPPPR QKKQAPKQPP KPKKPKPQEK KKKQPAKTKP GKRqrmalkl eadrlfdvkn edgdvighal amegkvmkpl hvkgtidhpv lsklkftkss aydmefaqlp vnmrseafty tsehpegfyn whhgavqysg grftiprgvg grgdsgrpim dnsgrvvaiv lggadegtrt alsvvtwnsk gktikttpeg teewsaaplv tamcllgnvs fpcnrpptcy trepsraldi leenvnheay dtllnailrc gsSGRSKRSV tddftltspy lgtcsychht epcfspikie qvwdeaddnt iriqtsaqfg ydksgaastn kyrymsfeqd htvkegtmdd ikistsgpcr rlsykgyfll akcppgdsvt vsiassnsat sctmarkikp kfvgrekydl ppvhgkkipc tvydrlkett agyitmhrpg phaytsylee ssgkvyakpp sgknityeck cgdyktgtvt trteitgcta ikqcvayksd qtkwvfnspd lirhadhtaq gklhlpfkli pstcmvpvah apnvihgfkh islqldtdhl tllttrrlga npepttewii gktvrnftvd rdgleyiwgn hepvrvyaqe sapgdphgwp heivqhyyhr hpvytilava saavammigv tvaalcacka rrecltpyal apnaviptsl allccvrsan aetftetmsy fwsnsqpffw vqlciplaav ivlmrccscc lpflvvagay lakvdayeha ttvpnvpqip ykalveragy aplnleitvm ssevlpstnq eyitckfttv vpspkvkccg slecqpaaha dytckvfggv ypfmwggaqc fcdsensqms eayvelsadc atdhaqaikv htaamkvglr ivygnttsfl dvyvngvtpg tskdlkviag pisasftpfd hkvvihrglv ynydfpeyga mkpgvfgdiq atsltskdli astdirllkp saknvhvpyt qaasgfemwk nnsgrplqet apfgckiavn plravdcsyg nipisidipn aafirtsdap lvstvkcdvs ectysadfgg matlqyvsDR EGQCPVHSHS STATlqestv hvlekgavtv hfstaspqan fivslcgkkt tcnaeckppa dhivstphkn dqefqaaisk tswswlfalf ggasslliig ltifacsmml tstrr
| JOB-ID | P27285_163542ZivX3X8AAQEAAHG53i0AAAAB |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P27285 |
| Description | sp|P27285|POLS_SINDO Structural polyprotein OS=Sindbis virus subtype Ockelbo (strain Edsbyn 82-5) OX=31699 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1245 |
| Download predictions | smoothed scores raw scores |