Download PostScript file
>P35963_LOOPS
1-29, 42-54, 64-72, 120-149, 162-183, 211-239, 249-260, 275-294, 349-358, 381-424, 435-501, 512-573, 580-614, 630-660, 676-748, 753-765, 773-783, 799-841, 874-884, 896-909, 932-950, 970-983, 996-1009, 1018-1060, 1075-1086, 1093-1101, 1123-1133, 1169-1178, 1190-1215, 1229-1242, 1252-1269, 1281-1296, 1332-1343, 1373-1409, 1419-1435
MGARASVLSA GELDKWEKIR LRPGGKKQYr lkhivwasre lERFAVDPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq kievkdtkea lekieeeqnk skkkaqqaaA DTGNSSQVSQ NYPIVQNLQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaa EWDRLHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamsqv tnsatimmqr GNFRNQRKTV KCFNCGKEGH IAKNCRAPRK KGCWKCGKEG HQMKdcterq anflREDLAF PQGKARKFSS EQTRANSPIR RERQVWRRDN NSLSEAGADR QGTVSFSFPQ ITLWQRPLVT Ikiggqlkea lLDTGADDTV LEEMNLPGRW KPKMIGGIGG FIKVRQYDQI PIEICGHKAI GTVLVGPTPV NIIgrnlltQ IGCTLNFPIS PIETVPVKLK PGMDGPKVKQ WPLTeekika lveictemeK EGKISKIGPE NPYNTPVFAI KKKDSTKWRK lvdfrelnkr tqdfwEVQLG IPHPAGLKKK KSVTVLDVGD AYFSVPLHED FRKYTAFTIP SINNETPGTR YQYNVLPQGW KGSPAIFQss mtTILEPFRK QNPDLviyqy mdDLYVGSDL EIGqhrtkie elrqhllrWG FTTPDKKHQK EPPFLWMGYE LHPDKWTVQP IVLPEKDSWT Vndiqklvgk lnwasqiyag ikvrqlckll rgtKALTEVI PLTEeaelel aenreILKEP VHGVYYDPSk dliaeiqkqg qgqwtyqiyq ePFKNLKTGK YARTRGAHTN dvkqlteavq kiatesiviW GKTPKFKLPI QKEtwetwwt eywqaTWIPE WEFVNTPPLv klwyqleKEP IIGAETFYVD GAANRETKLG KAGYVTNKGR QKVVSLTDTT nqktelqaiy lalqDSGLEV NIVTDSqyal giIQAQPDRS Eselvsqiie qlikkekvyl awVPAHKGIG GNEqvdklvs agirkvlfld gidkaqeehe kyhsnwraMA SDFNLPPVva keivascdkC QLKGEAMHGQ VDCSPGIWQL DCTHLegkvi lvavhvasGY IEAEVIPAET GQetayfllk lAGRWPVTTI HTDNGSNFTs atvkaacwwa GIKQEFGIPY NPQSQGvves mnkelkkiig qvrdqaehlk tavqmavfih nFKRKGGIGG YSAgerivdi iatdiqtkel qkqitkiqnf rvYYRDSRDP LWKGPAKLLW KGEGAVVIQD NSDIKVVPRr kakiirdyGK QMAGDDCVAG RQDED
>P35963_HOTLOOPS
1-31, 120-129, 280-292, 397-410, 439-486, 522-535, 594-615, 630-659, 669-693, 718-728, 801-811, 874-886, 965-980, 1035-1063, 1261-1269, 1390-1410, 1415-1435
MGARASVLSA GELDKWEKIR LRPGGKKQYR Lkhivwasre lerfavdpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq kievkdtkea lekieeeqnk skkkaqqaaA DTGNSSQVSq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrktv kcfncgKEGH IAKNCRAPRK kgcwkcgkeg hqmkdcterq anflredlAF PQGKARKFSS EQTRANSPIR RERQVWRRDN NSLSEAGADR QGTVSFsfpq itlwqrplvt ikiggqlkea lldtgaddtv lEEMNLPGRW KPKMIggigg fikvrqydqi pieicghkai gtvlvgptpv niigrnlltq igctlnfpis pieTVPVKLK PGMDGPKVKQ WPLTEekika lveictemeK EGKISKIGPE NPYNTPVFAI KKKDSTKWRk lvdfrelnKR TQDFWEVQLG IPHPAGLKKK KSVtvldvgd ayfsvplhed frkytafTIP SINNETPGtr yqynvlpqgw kgspaifqss mttilepfrk qnpdlviyqy mddlyvgsdl eigqhrtkie elrqhllrwg FTTPDKKHQK Eppflwmgye lhpdkwtvqp ivlpekdswt vndiqklvgk lnwasqiyag ikvrqlckll rgtKALTEVI PLTEEAelel aenreilkep vhgvyydpsk dliaeiqkqg qgqwtyqiyq epfknlktgk yartrgahtn dvkqlteavq kiatESIVIW GKTPKFKLPI qketwetwwt eywqatwipe wefvntpplv klwyqlekep iigaetfyvd gaanRETKLG KAGYVTNKGR QKVVSLTDTT NQKtelqaiy lalqdsglev nivtdsqyal giiqaqpdrs eselvsqiie qlikkekvyl awvpahkgig gneqvdklvs agirkvlfld gidkaqeehe kyhsnwrama sdfnlppvva keivascdkc qlkgeamhgq vdcspgiwql dcthlegkvi lvavhvasgy ieaevipaet gqetayfllk lagrwpvtti HTDNGSNFTs atvkaacwwa gikqefgipy npqsqgvves mnkelkkiig qvrdqaehlk tavqmavfih nfkrkggigg ysagerivdi iatdiqtkel qkqitkiqnf rvyyrdsrdp lwkgpakllW KGEGAVVIQD NSDIKVVPRR kakiIRDYGK QMAGDDCVAG RQDED
>P35963_REM465
1-9, 106-128, 444-461, 1097-1105, 1358-1367, 1402-1435
MGARASVLSa geldkwekir lrpggkkqyr lkhivwasre lerfavdpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq kievkdtkea lekieEEQNK SKKKAQQAAA DTGNSSQVsq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrktv kcfncgkegh iakncraprk kgcwkcgkeg hqmkdcterq anflredlaf pqgKARKFSS EQTRANSPIR Rerqvwrrdn nslseagadr qgtvsfsfpq itlwqrplvt ikiggqlkea lldtgaddtv leemnlpgrw kpkmiggigg fikvrqydqi pieicghkai gtvlvgptpv niigrnlltq igctlnfpis pietvpvklk pgmdgpkvkq wplteekika lveictemek egkiskigpe npyntpvfai kkkdstkwrk lvdfrelnkr tqdfwevqlg iphpaglkkk ksvtvldvgd ayfsvplhed frkytaftip sinnetpgtr yqynvlpqgw kgspaifqss mttilepfrk qnpdlviyqy mddlyvgsdl eigqhrtkie elrqhllrwg fttpdkkhqk eppflwmgye lhpdkwtvqp ivlpekdswt vndiqklvgk lnwasqiyag ikvrqlckll rgtkaltevi plteeaelel aenreilkep vhgvyydpsk dliaeiqkqg qgqwtyqiyq epfknlktgk yartrgahtn dvkqlteavq kiatesiviw gktpkfklpi qketwetwwt eywqatwipe wefvntpplv klwyqlekep iigaetfyvd gaanretklg kagyvtnkgr qkvvsltdtt nqktelqaiy lalqdsglev nivtdsqyal giiqaqPDRS ESELVsqiie qlikkekvyl awvpahkgig gneqvdklvs agirkvlfld gidkaqeehe kyhsnwrama sdfnlppvva keivascdkc qlkgeamhgq vdcspgiwql dcthlegkvi lvavhvasgy ieaevipaet gqetayfllk lagrwpvtti htdngsnfts atvkaacwwa gikqefgipy npqsqgvves mnkelkkiig qvrdqaehlk tavqmavfih nfkrkggigg ysagerivdi iatdiqtKEL QKQITKIqnf rvyyrdsrdp lwkgpakllw kgegavviqd nSDIKVVPRR KAKIIRDYGK QMAGDDCVAG RQDED
| JOB-ID | P35963_224757ZiL0nX8AAQEAAESTpJgAAABP |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P35963 |
| Description | sp|P35963|POL_HV1Y2 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) OX=362651 GN=gag-pol PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 1435 |
| Download predictions | smoothed scores raw scores |