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>P55135_LOOPS
1-12, 22-55, 70-96, 118-128, 134-168, 204-265, 296-305, 344-368, 386-396, 415-433
MAQFYSAKRR TTtrqiitvs vNDLDSFGQG VARHNGKTLF IPGLLPQENA EVTVTedkkq yarakvvrrL SDSPERETPR CPHFGVCGGC QQQHASvdlq qrsksaalar lmkhdvsEVI ADVPWGYRrr arlSLNYLPK TQQLQMGFRK AGSSDIVDVK QCPILAPQle allpkvracl gslqamrhlg hvelvqatsg tlmILRHTAP LSSADREKLE RFSHSEGLDL YLAPDSEILE TVSGEMPWYD SNGLRLTFSP RDFIQvnagv nqkmvarale wldvqpedrv ldlfcGMGNF TLPLAtqaas vvgvegvpal vekgqqnarl nglqnvtfyh enlEEDVTKQ PWAKNGFDKV LLDPARAGaa gvmqqiikle pirivYVSCN PATLARdsea llkagytiar lamlDMFPHT GHLESMVLFS RVK
>P55135_HOTLOOPS
1-17, 38-49, 54-79, 114-126, 225-234, 420-433
MAQFYSAKRR TTTRQIItvs vndldsfgqg varhngkTLF IPGLLPQENa evtVTEDKKQ YARAKVVRRL SDSPERETPr cphfgvcggc qqqhasvdlq qrsksaalar lmkHDVSEVI ADVPWGyrrr arlslnylpk tqqlqmgfrk agssdivdvk qcpilapqle allpkvracl gslqamrhlg hvelvqatsg tlmilrhtap lssadrekle rfshSEGLDL YLAPdseile tvsgempwyd snglrltfsp rdfiqvnagv nqkmvarale wldvqpedrv ldlfcgmgnf tlplatqaas vvgvegvpal vekgqqnarl nglqnvtfyh enleedvtkq pwakngfdkv lldparagaa gvmqqiikle pirivyvscn patlardsea llkagytiar lamldmfphT GHLESMVLFS RVK
>P55135_REM465
1-11, 66-78
MAQFYSAKRR Tttrqiitvs vndldsfgqg varhngktlf ipgllpqena evtvtedkkq yarakVVRRL SDSPERETpr cphfgvcggc qqqhasvdlq qrsksaalar lmkhdvsevi advpwgyrrr arlslnylpk tqqlqmgfrk agssdivdvk qcpilapqle allpkvracl gslqamrhlg hvelvqatsg tlmilrhtap lssadrekle rfshsegldl ylapdseile tvsgempwyd snglrltfsp rdfiqvnagv nqkmvarale wldvqpedrv ldlfcgmgnf tlplatqaas vvgvegvpal vekgqqnarl nglqnvtfyh enleedvtkq pwakngfdkv lldparagaa gvmqqiikle pirivyvscn patlardsea llkagytiar lamldmfpht ghlesmvlfs rvk
| JOB-ID | P55135_112143Zio8x38AAQEAAB1l2lMAAAAQ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P55135 |
| Description | sp|P55135|RLMD_ECOLI 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Escherichia coli (strain K12) OX=83333 GN=rlmD PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 433 |
| Download predictions | smoothed scores raw scores |