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>P60281_LOOPS
10-51, 66-76, 83-106, 111-124, 130-161, 171-223, 245-262, 271-281, 309-327, 341-365, 394-410, 423-489, 495-516, 521-548, 556-575, 601-620, 653-661, 667-705, 715-723, 731-769, 775-807, 820-838, 843-854, 869-918, 930-1015, 1028-1059, 1081-1089, 1099-1109, 1127-1143, 1155-1169
mlegcilavS SQSKSNAITN NSVPGAPNRV SFAKLREPLE VPGLLDVQTD Sfewlvgsdr wrqaaIDRGE ENPVGGleev laELSPIEDF SGSMSLSFSD PRFDEVkasv DECKDKDMTY AAPLfvtaeF INNNTGEIKS QTVFMGDFPM MTEKGTFIIN Gtervvvsql VRSPGVYFDE TIDKSTEKTL HSVKVIPGRG AWLEFDVDKR DTVGVRIDRK RRQpvtvllk algwtneqiv erfgFSEIMM GTLEKDTTSG TDealldiyr KLRPGEPPTK Esaqtllenl ffkekrydla rvgrykvnKK LGLNAGKPIT SSTLTEEdvv atieylvrlh EGQTSMTVPG GVEVPVEVDD IDHFGnrrlr tvgeliqnqi rvglsrmerv vreRMTTQDV EAITPQTLIN irpvvaaike ffGTSQLSQF MDQNNPLSGL THKRRLSALG PGGLSRERAG LEVRDVHPSH YGRMCPIETP EGPNIGLIGs lsvyARVNPF GFIETPYRKV ENGVVTdqid YLTADEEDRH VVAQANSPTD ENGRFTEDrv mvrkkGGEVE FVSADQVDYM DVSPRqmvsv atamipfleh ddanralmga NMQRQAVPLV RSEAPLVGTG melraaidag dvvvadktgv ieevsadyit vmADDGTRQS YrlrkfARSN HGTCANQRPI VDAGQRVEAG QVIADGPCTQ NGEMAlgknl lvaiMPWEGH NYEdaiilsn RLVEEDVLTS IHIEEHEIDA RDTKLGAEEI TRDIPNVSDe vladLDERGI VRIGAEVRDG DILVGKVTPK GETELTPeer llraifgekA REVRDTSLKV PHGESGKVig irVFSREDDD ELPAgvnelv rvyvaqkrKI SDGDKLAGRH GNKGVIGKIL PVEDMPFLPD GTPVDIILNT HGVPRRMNig qilethlgwV AKAGWNIDVA AGVPDWASKL PEELYSAPAD STVATPVFDG AQEGELAGLL GSTLPNRDGE VMVDADGKST LFDGRSGEPF PYPVTvgymy ilklhhlVDD KIHARSTGPY SMITQQPLGG KAQFGGQRFg emecwamqay gaaytlqell TIKSDDTVGr vkvyeaivKG ENIPEPGIPe sfkvllkelq slclnvEVLS SDGAAIEMRD GDDedleraa anlgINLSRN ESASVEDLA
>P60281_HOTLOOPS
11-27, 177-224, 229-239, 252-262, 272-282, 303-328, 341-352, 366-389, 394-411, 450-461, 503-513, 532-549, 556-572, 667-683, 741-774, 780-810, 815-855, 867-892, 998-1008, 1082-1089, 1097-1107, 1152-1169
mlegcilavs SQSKSNAITN NSVPGAPnrv sfaklreple vpglldvqtd sfewlvgsdr wrqaaidrge enpvggleev laelspiedf sgsmslsfsd prfdevkasv deckdkdmty aaplfvtaef innntgeiks qtvfmgdfpm mtekgtfiin gtervvvsql vrspgvYFDE TIDKSTEKTL HSVKVIPGRG AWLEFDVDKR DTVGVRIDRK RRQPvtvlLK ALGWTNEQIv erfgfseimm gTLEKDTTSG TDealldiyr kLRPGEPPTK ESaqtllenl ffkekrydla rvGRYKVNKK LGLNAGKPIT SSTLTEEDvv atieylvrlh EGQTSMTVPG GVevpvevdd idhfgNRRLR TVGELIQNQI RVGLSRMERv vreRMTTQDV EAITPQTLIN Irpvvaaike ffgtsqlsqf mdqnnplsgl thkrrlsalG PGGLSRERAG Levrdvhpsh ygrmcpietp egpnigligs lsvyarvnpf gfIETPYRKV ENGvvtdqid yltadeedrh vVAQANSPTD ENGRFTEDRv mvrkkGGEVE FVSADQVDYM DVsprqmvsv atamipfleh ddanralmga nmqrqavplv rseaplvgtg melraaidag dvvvadktgv ieevsadyit vmaddgtrqs yrlrkfARSN HGTCANQRPI VDAgqrveag qviadgpctq ngemalgknl lvaimpwegh nyedaiilsn rlveedvlts IHIEEHEIDA RDTKLGAEEI TRDIPNVSDE VLADldergI VRIGAEVRDG DILVGKVTPK GETELTPEER llraIFGEKA REVRDTSLKV PHGESGKVIG IRVFSREDDD ELPAGvnelv rvyvaqKRKI SDGDKLAGRH GNKGVIGKIL PVedmpflpd gtpvdiilnt hgvprrmnig qilethlgwv akagwnidva agvpdwaskl peelysapad stvatpvfdg aqegelagll gstlpnrdge vmvdadgKST LFDGRSGEpf pypvtvgymy ilklhhlvdd kiharstgpy smitqqplgg kaqfggqrfg emecwamqay gaaytlqell tIKSDDTVGr vkvyeaIVKG ENIPEPGipe sfkvllkelq slclnvevls sdgaaiemrd gddedleraa aNLGINLSRN ESASVEDLA
>P60281_REM465
1160-1169
mlegcilavs sqsksnaitn nsvpgapnrv sfaklreple vpglldvqtd sfewlvgsdr wrqaaidrge enpvggleev laelspiedf sgsmslsfsd prfdevkasv deckdkdmty aaplfvtaef innntgeiks qtvfmgdfpm mtekgtfiin gtervvvsql vrspgvyfde tidkstektl hsvkvipgrg awlefdvdkr dtvgvridrk rrqpvtvllk algwtneqiv erfgfseimm gtlekdttsg tdealldiyr klrpgepptk esaqtllenl ffkekrydla rvgrykvnkk lglnagkpit sstlteedvv atieylvrlh egqtsmtvpg gvevpvevdd idhfgnrrlr tvgeliqnqi rvglsrmerv vrermttqdv eaitpqtlin irpvvaaike ffgtsqlsqf mdqnnplsgl thkrrlsalg pgglsrerag levrdvhpsh ygrmcpietp egpnigligs lsvyarvnpf gfietpyrkv engvvtdqid yltadeedrh vvaqansptd engrftedrv mvrkkggeve fvsadqvdym dvsprqmvsv atamipfleh ddanralmga nmqrqavplv rseaplvgtg melraaidag dvvvadktgv ieevsadyit vmaddgtrqs yrlrkfarsn hgtcanqrpi vdagqrveag qviadgpctq ngemalgknl lvaimpwegh nyedaiilsn rlveedvlts ihieeheida rdtklgaeei trdipnvsde vladldergi vrigaevrdg dilvgkvtpk geteltpeer llraifgeka revrdtslkv phgesgkvig irvfsreddd elpagvnelv rvyvaqkrki sdgdklagrh gnkgvigkil pvedmpflpd gtpvdiilnt hgvprrmnig qilethlgwv akagwnidva agvpdwaskl peelysapad stvatpvfdg aqegelagll gstlpnrdge vmvdadgkst lfdgrsgepf pypvtvgymy ilklhhlvdd kiharstgpy smitqqplgg kaqfggqrfg emecwamqay gaaytlqell tiksddtvgr vkvyeaivkg enipepgipe sfkvllkelq slclnvevls sdgaaiemrd gddedleraa anlginlsrN ESASVEDLA
| JOB-ID | P60281_053239ZiiZdn8AAQEAAE7yzosAAABY |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P60281 |
| Description | sp|P60281|RPOB_MYCS2 DNA-directed RNA polymerase subunit beta OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=rpoB PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1169 |
| Download predictions | smoothed scores raw scores |