Download PostScript file
>Q99AU2_LOOPS
1-122, 132-146, 161-173, 186-193, 202-211, 220-239, 244-259, 288-316, 381-394, 404-413, 419-432, 447-624, 645-688, 778-787, 857-871, 902-911, 947-961, 971-979, 986-1032, 1046-1056, 1080-1177, 1188-1245, 1267-1327, 1348-1396, 1420-1429, 1440-1533, 1543-1553, 1567-1584, 1595-1605, 1613-1628, 1688-1699, 1709-1718, 1776-1786, 1795-1805, 1816-1827, 1869-1878, 1884-1891, 1903-1911, 1924-1940, 1965-1978, 1995-2078, 2098-2142, 2153-2167, 2174-2182, 2189-2225, 2238-2271, 2279-2334, 2350-2410, 2420-2442, 2456-2475, 2506-2530, 2547-2588, 2601-2619, 2628-2651, 2680-2711, 2728-2735, 2762-2811, 2819-2830, 2865-2879, 2887-2900, 2909-2918, 2933-2940, 2952-2986, 3002-3010
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YPWPLYGNEG MGWAGWLLSP RGSRPSWGPT DPRRRSRNLG KVidtltcgf aDLMGYIPLV GAPLGGaara lahgvrvled GVNYATGNLP GCSfsiflla llsclTIPAS AYEvrnvsgi yHVTNDCSNS SivyeaadmI MHTPGCVPCV RESNFSRCWv altPTLAARN SSIPTTTIRr hvdllvgaaa lcsamyvgdl cgsvflvSQL FTFSPRRYET VQDCNCSIYP GHVSGHrmaw dmmmnwsptt alvvsqllri pqavvdmvag ahwgvlagla yysmvgnwak vlivmllfag VDGHTHVTGG RVASstqslv swlSQGPSQK IQLvntngSW HINRTALNCN DSlqtgfiaa lfyahrFNAS GCPERMASCR PIDKFAQGWG PITHVVPNIS DQRPYCWHYA PQPCGIVPAS QVCGPVYCFT PSPVVVGTTD RSGVPTYSWG ENETDVLLLN NTRPPQGNWF GCTWMNSTGF TKTCGGPPCN IGGVGNNTLI CPTDCFRKHP EATYTKCGSG PWLTPRCLVD YPYRLWHYPC TINFtifkvr myvggvehrl naacNWTRGE RCDLEDRDRS ELSPLLLSTT EWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgsvvv svvikweyvl llfllladar vcaclwmmll iaqaeatlen lvvlnaasva gahgllsflv ffcaawyIKG RLVPGAAyal ygvwplllll lalpprayam dremaascgg avfvglvllt lspyykvfla rliwwlqyfi traeahLQVW VPPLNVRGGR Daiilltcav hpelifditk lllailgplm vLQAGITRVP Yfvraqglih acmlvrkvag ghyvqmafmk lgaltgTYIY NHLTPLRDWA Haglrdlava VEPVVFSDMe tkiitWGADT AACGDIILGL PVSARRGKEI LLGPADSLEG RGWRLLAPIT AYsqqtrgll gciitSLTGR DKNQVEgevq vvstatqsfl atcvngvcwT VYHGAGSKTL AGPKGPITQM YTNVDQDLVG WQAPPGARSL TPCTCGSSDL YLVTRHADVI PVRRRGDSRG SLLSPRPVSY LKGSSGGPLL CPSGHAVgif raavctrGVA KAVDFVPVES METTMRSPVF TDNSSPPAVP QSFQVAHLHA PTGSGKSTKV PAAYAaqgyk vlvlnpsvaa tlgfgaYMSK AHGIDPNIRT GVRTITTGAP VTYSTYGKFL ADGGCSGGAY DIIICDECHS TDSTTILgig tvldqaetag arlvvlaTAT PPGSVTVPHP NIEEVALSNT GEIPFYGKAI PIEAIRGGRH LIFCHSkkkc delaaklsgl ginavayyrG LDVSVIPTIg dvvvvatdaL MTGYTGDFDS VIDCNTCVTQ TVDFSLDPTF TIETTTVPQD AVSRSQRRGR TGRGRRGIYR FVTPGERPSG MFDSSVLCEC YDAGCAWYEL TPAetsvrlr ayLNTPGLPV CQDhlefwes vftgltHIDA HFLSQTKQAG DNFPylvayq atvcARAQAP PPSWDqmwkc liRLKPTLHG PTPLLYRLga vqnevtlthp itkyimacms adlevvtstw vlvggvlaal aayclttgsv vivgriiLSG RPAIVPDREl lyqefdemEE CATHLPYIeq gmqlaeqfkq kalgllqtat kqaeaaapvv eskwraletf wakhmwnfis giqylAGLST LPGNPAiasl maftASITSP LTTQStllfn ilggwVAAQL APPSAASafv gagiagaavg siglgkvlvd ilagygagva galvafkvMS GEMPSTEDlv nllPAILSPG Alvvgvvcaa ilRRHVGPGE Gavqwmnrli afaSRGNHVS PTHYVPESDA aarvtqilss ltitqllkrl hqwiNEDCST PCSGSWLRdv wdwictvltd fktwLQSKLL PQLPGVPFFS CQRGYKGVWR GDGIMQTTCP CGAQITGHVK NGSMRIVGPK TCSNTWHGTF PINAYTTGPC TPSPAPNYsr alwrvaaeey vevtrvgDFH YVTGMTTDNV KCPCQVPAPE FFSEVDGVRL HRYAPACRPL LReevtfqvg lnQYLVGSQL PCEPEPDvav ltsMLTDPSH ITaetakrRL ARGSPPSLAS SSASQLSAPS LKATCTTHHV SPDADliean llwrqemGGN ITRVESENKV VVLDSFDPLR AEEDEREVSV PaeilrksKK FPAAMPIWAR PDYNPPLLES WKDPDYVPPV VHGCPLPPIK APPIPPPRRK RTVVltessv ssalaelatK TFGSSESSAV DSGTATALPD QASDDGDKGS DVESYSSMPP LEGEPGDPDL SDGSWSTVSE easedvvccS MSYTWTGALI TPCAAEESKL PInalsnsll rhhnmVYATT SRSAGLRQKK VTFDRlqvld dhyrdvlkem kakastvkak llsveEACKL TPPHSAKSKF GYGAKDVRNL sskavnhihs vwkdllEDTV TPIDTTIMAK NEVFCVQPEK GGRKPARLIV FPDLGVRVce kmalydvvst LPQVVMGSSY GFQYSPGQRv eflvntwKSK KNPMGFSYDT RCFDSTVTEN Dirveesiyq ccdlapearq aikslterlY IGGPLTNSKG QNCGYRRCRA SGVLTTSCGN Tltcylkasa acraaklQDC TMLVNgddlv vicesagtqe daaslrvfte aMTRYSAPPG DPPQPEYDLE LITSCSSNVS VAHDASGKRV YYLTRDPTTP LaraawetAR HTPVNSWLGN iimyaptlwa rmilmthffs illaqeqlek aldcQIYGAC YSIEPLDLPq iierlhGLSA FSLHSYSPGE inrvasclRK LGVPPLRVwr hrarsvrarl lsQGGRAATC gkylfnwavk tKLKLTPIPA ASQLDLSGWF VAGYSGGDIY HSLSRArprw fmlcllllsv gVGIYLLPNR
>Q99AU2_HOTLOOPS
1-78, 105-120, 245-259, 593-604, 1012-1021, 1135-1157, 1271-1282, 1350-1359, 1471-1511, 2240-2288, 2317-2328, 2350-2378, 2388-2401, 2458-2477, 2506-2523, 2565-2581, 2630-2642, 2682-2694, 2789-2800, 2819-2830, 2911-2920, 2929-2940, 3000-3010
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQpg ypwplygneg mgwagwllsp rgsrPSWGPT DPRRRSRNLG kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltipas ayevrnvsgi yhvtndcsns sivyeaadmi mhtpgcvpcv resnfsrcwv altpTLAARN SSIPTTTIRr hvdllvgaaa lcsamyvgdl cgsvflvsql ftfsprryet vqdcncsiyp ghvsghrmaw dmmmnwsptt alvvsqllri pqavvdmvag ahwgvlagla yysmvgnwak vlivmllfag vdghthvtgg rvasstqslv swlsqgpsqk iqlvntngsw hinrtalncn dslqtgfiaa lfyahrfnas gcpermascr pidkfaqgwg pithvvpnis dqrpycwhya pqpcgivpas qvcgpvycft pspvvvgttd rsgvptyswg enetdvllln ntrppqgnwf gctwmnstgf tktcggppcn iggvgnntli cptdcfrkhp eaTYTKCGSG PWLTprclvd ypyrlwhypc tinftifkvr myvggvehrl naacnwtrge rcdledrdrs elsplllstt ewqvlpcsft tlpalstgli hlhqnivdvq ylygvgsvvv svvikweyvl llfllladar vcaclwmmll iaqaeatlen lvvlnaasva gahgllsflv ffcaawyikg rlvpgaayal ygvwplllll lalpprayam dremaascgg avfvglvllt lspyykvfla rliwwlqyfi traeahlqvw vpplnvrggr daiilltcav hpelifditk lllailgplm vlqagitrvp yfvraqglih acmlvrkvag ghyvqmafmk lgaltgtyiy nhltplrdwa haglrdlava vepvvfsdme tkiitwgadt aacgdiilgl pvsarrgkei lLGPADSLEG Rgwrllapit aysqqtrgll gciitsltgr dknqvegevq vvstatqsfl atcvngvcwt vyhgagsktl agpkgpitqm ytnvdqdlvg wqappgarsl tpctcgssdl ylvtRHADVI PVRRRGDSRG SLLSPRPvsy lkgssggpll cpsghavgif raavctrgva kavdfvpves mettmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsk AHGIDPNIRT GVrtittgap vtystygkfl adggcsggay diiicdechs tdsttilgig tvldqaetag arlvvlataT PPGSVTVPHp nieevalsnt geipfygkai pieairggrh lifchskkkc delaaklsgl ginavayyrg ldvsviptig dvvvvatdal mtgytgdfds vidcntcvtq tvdfsldptf TIETTTVPQD AVSRSQRRGR TGRGRRGIYR FVTPGERPSG Mfdssvlcec ydagcawyel tpaetsvrlr aylntpglpv cqdhlefwes vftglthida hflsqtkqag dnfpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqnevtlthp itkyimacms adlevvtstw vlvggvlaal aayclttgsv vivgriilsg rpaivpdrel lyqefdemee cathlpyieq gmqlaeqfkq kalgllqtat kqaeaaapvv eskwraletf wakhmwnfis giqylaglst lpgnpaiasl maftasitsp lttqstllfn ilggwvaaql appsaasafv gagiagaavg siglgkvlvd ilagygagva galvafkvms gempstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtqilss ltitqllkrl hqwinedcst pcsgswlrdv wdwictvltd fktwlqskll pqlpgvpffs cqrgykgvwr gdgimqttcp cgaqitghvk ngsmrivgpk tcsntwhgtf pinayttgpc tpspapnysr alwrvaaeey vevtrvgdfh yvtgmttdnv kcpcqvpape ffsevdgvrl hryapacrpl lreevtfqvg lnqylvgsql pcepepdvav ltsmltdpsh itaetakrrl argsppslas ssasqlsaps lkatctthhv spdadliean llwrqemggN ITRVESENKV VVLDSFDPLR AEEDEREVSV PAEILRKSKK FPAAMPIWar pdynpplles wkdpdyvppv vhgcplPPIK APPIPPPRrk rtvvltessv ssalaelatK TFGSSESSAV DSGTATALPD QASDDGDKgs dvesyssMPP LEGEPGDPDL Sdgswstvse easedvvccs msytwtgali tpcaaeeskl pinalsnsll rhhnmvyATT SRSAGLRQKK VTFDRLQvld dhyrdvlkem kakastvkak llsveEACKL TPPHSAKSKF GYGakdvrnl sskavnhihs vwkdlledtv tpidttimak nevfCVQPEK GGRKPARLIV Fpdlgvrvce kmalydvvst lpqvvmgssy gfqyspgqrv eflvntwksK KNPMGFSYDT RCfdstvten dirveesiyq ccdlapearq aikslterly iGGPLTNSKG QNCGyrrcra sgvlttscgn tltcylkasa acraaklqdc tmlvngddlv vicesagtqe daaslrvfte amtrysappg dppqpeydle litscssnVS VAHDASGKRV yyltrdpttp laraawetAR HTPVNSWLGN iimyaptlwa rmilmthffs illaqeqlek aldcqiygac ysiepldlpq iierlhglsa fslhsyspge inrvasclrk LGVPPLRVWR hrarsvraRL LSQGGRAATC gkylfnwavk tklkltpipa asqldlsgwf vagysggdiy hslsrarprw fmlcllllsV GVGIYLLPNR
>Q99AU2_REM465
1-17, 47-74, 103-113, 1479-1492, 1739-1750, 2187-2213, 2350-2414
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PEGRtwaqpg ypwplygneg mgwagwllsp rgSRPSWGPT DPRrrsrnlg kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltipas ayevrnvsgi yhvtndcsns sivyeaadmi mhtpgcvpcv resnfsrcwv altptlaarn ssiptttirr hvdllvgaaa lcsamyvgdl cgsvflvsql ftfsprryet vqdcncsiyp ghvsghrmaw dmmmnwsptt alvvsqllri pqavvdmvag ahwgvlagla yysmvgnwak vlivmllfag vdghthvtgg rvasstqslv swlsqgpsqk iqlvntngsw hinrtalncn dslqtgfiaa lfyahrfnas gcpermascr pidkfaqgwg pithvvpnis dqrpycwhya pqpcgivpas qvcgpvycft pspvvvgttd rsgvptyswg enetdvllln ntrppqgnwf gctwmnstgf tktcggppcn iggvgnntli cptdcfrkhp eatytkcgsg pwltprclvd ypyrlwhypc tinftifkvr myvggvehrl naacnwtrge rcdledrdrs elsplllstt ewqvlpcsft tlpalstgli hlhqnivdvq ylygvgsvvv svvikweyvl llfllladar vcaclwmmll iaqaeatlen lvvlnaasva gahgllsflv ffcaawyikg rlvpgaayal ygvwplllll lalpprayam dremaascgg avfvglvllt lspyykvfla rliwwlqyfi traeahlqvw vpplnvrggr daiilltcav hpelifditk lllailgplm vlqagitrvp yfvraqglih acmlvrkvag ghyvqmafmk lgaltgtyiy nhltplrdwa haglrdlava vepvvfsdme tkiitwgadt aacgdiilgl pvsarrgkei llgpadsleg rgwrllapit aysqqtrgll gciitsltgr dknqvegevq vvstatqsfl atcvngvcwt vyhgagsktl agpkgpitqm ytnvdqdlvg wqappgarsl tpctcgssdl ylvtrhadvi pvrrrgdsrg sllsprpvsy lkgssggpll cpsghavgif raavctrgva kavdfvpves mettmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsk ahgidpnirt gvrtittgap vtystygkfl adggcsggay diiicdechs tdsttilgig tvldqaetag arlvvlatat ppgsvtvphp nieevalsnt geipfygkai pieairggrh lifchskkkc delaaklsgl ginavayyrg ldvsviptig dvvvvatdal mtgytgdfds vidcntcvtq tvdfsldptf tietttvpQD AVSRSQRRGR TGrgrrgiyr fvtpgerpsg mfdssvlcec ydagcawyel tpaetsvrlr aylntpglpv cqdhlefwes vftglthida hflsqtkqag dnfpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqnevtlthp itkyimacms adlevvtstw vlvggvlaal aayclttgsv vivgriilsg rpaivpdrel lyqefdemee cathlpyieq gmqlaeqfkq kalgllqtAT KQAEAAAPVV eskwraletf wakhmwnfis giqylaglst lpgnpaiasl maftasitsp lttqstllfn ilggwvaaql appsaasafv gagiagaavg siglgkvlvd ilagygagva galvafkvms gempstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtqilss ltitqllkrl hqwinedcst pcsgswlrdv wdwictvltd fktwlqskll pqlpgvpffs cqrgykgvwr gdgimqttcp cgaqitghvk ngsmrivgpk tcsntwhgtf pinayttgpc tpspapnysr alwrvaaeey vevtrvgdfh yvtgmttdnv kcpcqvpape ffsevdgvrl hryapacrpl lreevtfqvg lnqylvgsql pcepepdvav ltsmltdpsh itaetaKRRL ARGSPPSLAS SSASQLSAPS LKAtctthhv spdadliean llwrqemggn itrvesenkv vvldsfdplr aeederevsv paeilrkskk fpaampiwar pdynpplles wkdpdyvppv vhgcplppik appippprrk rtvvltessv ssalaelatK TFGSSESSAV DSGTATALPD QASDDGDKGS DVESYSSMPP LEGEPGDPDL SDGSWSTVSE EASEdvvccs msytwtgali tpcaaeeskl pinalsnsll rhhnmvyatt srsaglrqkk vtfdrlqvld dhyrdvlkem kakastvkak llsveeackl tpphsakskf gygakdvrnl sskavnhihs vwkdlledtv tpidttimak nevfcvqpek ggrkparliv fpdlgvrvce kmalydvvst lpqvvmgssy gfqyspgqrv eflvntwksk knpmgfsydt rcfdstvten dirveesiyq ccdlapearq aikslterly iggpltnskg qncgyrrcra sgvlttscgn tltcylkasa acraaklqdc tmlvngddlv vicesagtqe daaslrvfte amtrysappg dppqpeydle litscssnvs vahdasgkrv yyltrdpttp laraawetar htpvnswlgn iimyaptlwa rmilmthffs illaqeqlek aldcqiygac ysiepldlpq iierlhglsa fslhsyspge inrvasclrk lgvpplrvwr hrarsvrarl lsqggraatc gkylfnwavk tklkltpipa asqldlsgwf vagysggdiy hslsrarprw fmlcllllsv gvgiyllpnr
| JOB-ID | Q99AU2_065354ZiNmgn8AAQEAACXN1skAAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q99AU2 |
| Description | tr|Q99AU2|Q99AU2_9HEPC Genome polyprotein OS=Hepatitis C virus subtype 1b OX=31647 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3010 |
| Download predictions | smoothed scores raw scores |